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The map label for this gene is yfkF

Identifier: 16077858

GI number: 16077858

Start: 863862

End: 865037

Strand: Reverse

Name: yfkF

Synonym: BSU07910

Alternate gene names: 16077858

Gene position: 865037-863862 (Counterclockwise)

Preceding gene: 16077861

Following gene: 16077854

Centisome position: 20.52

GC content: 49.57

Gene sequence:

>1176_bases
ATGTCACGATTTCATTTCTTTATCCTTGTCTTGCTCGTTTCCATTTCCGGGTTTTCACAAGGCATGCTGCTGCCTGTCAT
TTCAATCATTTTTGAAACAAATGGAGAATCCGCTGCTATCAACGGCCTGCACGCGACCGGGCTGTATATCGGTGTGCTTT
TGGCTTCGCCGTTTATGGAAGCACCGCTCAGAAAGCTCGGGTTCAAGCCGCTGATCGTCATGGGCGGAAGCATTGTCATT
TTAAGCTTATTCGGATTTATTTGGCTTCAGTCAGTTTGGGTCTGGTTCCTGCTTCGCCTGTTCATTGGAATCGGCGACCA
CATGCTTCACTTTTCTACGCAAACGTGGGTGACCTCCATGTCATCAAAACAAAATCGCGGAAGAAACCTGTCTATTTATG
GGCTTTCCTTTGGCCTTGGCTTTGCCGCAGGCCCGTTCATGGTGCCGCTTGTCAAGCTGAGTCCGTCGCTTCCTTTTATC
GTGTCCGGCTGCATCAGTCTGTTTGCGTGGCTTTTTGTTTTCTTTCTACAAAATGCATACCCGGAAACCAGTCCTCATGA
AACCAAATCAGACAATAGTTTCAGGCGATTTTATCAGGCCATGCTGTTTGGGTGGGTTGCCTTTATGCCTACATTTGGCT
ATGGCTTTCTGGAAACGGCGCTGAACGGAAGCTTTCCGGTGTACGCGCTCCGTTTGGGGATATCAGTAGACGCAGTAGCG
ATCATCCTTCCCGCATTTGCGATTGGAAGCATTATCTTTCAGTTTCCGCTCGGCATCCTCAGCGATAAATACGGCAGGCG
GAATGTGCTGCTGGTGATTTTACTGACTGGGGCTCTTTGCTTTTTCATCGCCGGTGTATTTCCTTCGCCCTACGTGATCG
GCGGCTGCTTTTTTATTGCAGGAATGGCAGTCGGATCAACCTTTACACTTGGCATCAGCTATATGACAGACCTTCTTCCG
CCTCACCTCCTGCCGGCGGGAAACCTGCTTTGCGGCATTACATTCAGTCTCGGTAGCATCCTCGGCCCAGTTGCCGGCGG
CTGGTATATGCAGACATTTGAAAGCGCAAACTTGTTCTACTTCATTACTCTCACGCTTAGCTCTGTGTGGCTGGCCCTTG
TGCTGGGCAAACCGAAAAGCTGGTCACCGGCTGAAACCTATTCTTCATCTTCTTAA

Upstream 100 bases:

>100_bases
GAGGGCAAATGTATAGCGTGATATAGGCTTTTTTCAGGTTGCCTGCTTTTGGAAAACGTTGTACGATCAACATAGATTCC
ATATAAGGAGAACTGACACG

Downstream 100 bases:

>100_bases
TCAAAAAGCCTCCCGACATCATGTCAGGAGGCTTTTATGCTAATGGTAGCCGTTTTGTCCGTTGGCGCTTCCGCTTGTTT
TATGGCTCGATTTGCTTTTC

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYIGVLLASPFMEAPLRKLGFKPLIVMGGSIVI
LSLFGFIWLQSVWVWFLLRLFIGIGDHMLHFSTQTWVTSMSSKQNRGRNLSIYGLSFGLGFAAGPFMVPLVKLSPSLPFI
VSGCISLFAWLFVFFLQNAYPETSPHETKSDNSFRRFYQAMLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVA
IILPAFAIGSIIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVFPSPYVIGGCFFIAGMAVGSTFTLGISYMTDLLP
PHLLPAGNLLCGITFSLGSILGPVAGGWYMQTFESANLFYFITLTLSSVWLALVLGKPKSWSPAETYSSSS

Sequences:

>Translated_391_residues
MSRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYIGVLLASPFMEAPLRKLGFKPLIVMGGSIVI
LSLFGFIWLQSVWVWFLLRLFIGIGDHMLHFSTQTWVTSMSSKQNRGRNLSIYGLSFGLGFAAGPFMVPLVKLSPSLPFI
VSGCISLFAWLFVFFLQNAYPETSPHETKSDNSFRRFYQAMLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVA
IILPAFAIGSIIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVFPSPYVIGGCFFIAGMAVGSTFTLGISYMTDLLP
PHLLPAGNLLCGITFSLGSILGPVAGGWYMQTFESANLFYFITLTLSSVWLALVLGKPKSWSPAETYSSSS
>Mature_390_residues
SRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYIGVLLASPFMEAPLRKLGFKPLIVMGGSIVIL
SLFGFIWLQSVWVWFLLRLFIGIGDHMLHFSTQTWVTSMSSKQNRGRNLSIYGLSFGLGFAAGPFMVPLVKLSPSLPFIV
SGCISLFAWLFVFFLQNAYPETSPHETKSDNSFRRFYQAMLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVAI
ILPAFAIGSIIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVFPSPYVIGGCFFIAGMAVGSTFTLGISYMTDLLPP
HLLPAGNLLCGITFSLGSILGPVAGGWYMQTFESANLFYFITLTLSSVWLALVLGKPKSWSPAETYSSSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

Organism=Escherichia coli, GI1787126, Length=288, Percent_Identity=24.6527777777778, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFKF_BACSU (O34929)

Other databases:

- EMBL:   D83967
- EMBL:   AL009126
- PIR:   B69808
- RefSeq:   NP_388672.1
- ProteinModelPortal:   O34929
- SMR:   O34929
- EnsemblBacteria:   EBBACT00000000077
- GeneID:   939190
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU07910
- NMPDR:   fig|224308.1.peg.791
- GenoList:   BSU07910
- GeneTree:   EBGT00050000000117
- HOGENOM:   HBG313981
- OMA:   PAGNLLC
- PhylomeDB:   O34929
- ProtClustDB:   CLSK872855
- BioCyc:   BSUB:BSU07910-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 42691; Mature: 42560

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcd74d58)-; HASH(0xc1c39bc)-; HASH(0xc79643c)-; HASH(0xc850d70)-; HASH(0xd3c0bfc)-; HASH(0xc2c3424)-; HASH(0xd939020)-; HASH(0xd555408)-; HASH(0xde1ce84)-; HASH(0xd51f538)-; HASH(0xd7b1dd8)-; HASH(0xd7974ac)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYIGVLLASPFME
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCHHHH
APLRKLGFKPLIVMGGSIVILSLFGFIWLQSVWVWFLLRLFIGIGDHMLHFSTQTWVTSM
HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
SSKQNRGRNLSIYGLSFGLGFAAGPFMVPLVKLSPSLPFIVSGCISLFAWLFVFFLQNAY
HHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PETSPHETKSDNSFRRFYQAMLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEECCCHHHHH
IILPAFAIGSIIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVFPSPYVIGGCFFIA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GMAVGSTFTLGISYMTDLLPPHLLPAGNLLCGITFSLGSILGPVAGGWYMQTFESANLFY
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEE
FITLTLSSVWLALVLGKPKSWSPAETYSSSS
EHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
>Mature Secondary Structure 
SRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYIGVLLASPFME
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCHHHH
APLRKLGFKPLIVMGGSIVILSLFGFIWLQSVWVWFLLRLFIGIGDHMLHFSTQTWVTSM
HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
SSKQNRGRNLSIYGLSFGLGFAAGPFMVPLVKLSPSLPFIVSGCISLFAWLFVFFLQNAY
HHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PETSPHETKSDNSFRRFYQAMLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEECCCHHHHH
IILPAFAIGSIIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVFPSPYVIGGCFFIA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GMAVGSTFTLGISYMTDLLPPHLLPAGNLLCGITFSLGSILGPVAGGWYMQTFESANLFY
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEE
FITLTLSSVWLALVLGKPKSWSPAETYSSSS
EHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377