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The map label for this gene is yfkQ

Identifier: 16077846

GI number: 16077846

Start: 848633

End: 850174

Strand: Reverse

Name: yfkQ

Synonym: BSU07790

Alternate gene names: 16077846

Gene position: 850174-848633 (Counterclockwise)

Preceding gene: 16077851

Following gene: 16077845

Centisome position: 20.17

GC content: 44.75

Gene sequence:

>1542_bases
ATGAATAAACGCGACAAAGCGCTTCAGCTCATCAAAGAGCTTGAAGACAATCAGGACAGACCGATCTCTCCCAATTTGAA
GGAAAACCTCGAAAATCTGACCTTATTAACAGAAGGCTGCTCAGACATCGTATTTAGACAATTTGACTTTGGAAACGGGC
TGTGCGGATTTATTGTTTATATCGAAGGAATTGTAAAATCTGAACATATTCAGGATCACGCCCTCCGCCCTTTCTTAATG
CATTTGACGGATCAAATAGATGAACATGAAGAGGCGCTGCAAAATACTCTATCAATTTCAAGTGTTGCATTAGAAACGAG
TATGAGCAAAGTGGCTGCATCCATCATTGAGGGGAACGCGGTTTTATTTGCCGACGGGCACTCAAAAGGCCTGATCTTAA
ATATAAAAGGCGGACAAAGAAGAAGCATTGAAGAGCCGATAACAGAATCGACCATCAGAGGGTCAAGAGAGGGCTTCACT
GAAAGCCTCAGGGTCAATACCGCTCTTGTGCGCTTTCGCGTCAAAACGTTTCAGCTTAAAATGATCTCTTTTAAAATCGG
CACGAAAACCAAAACCGATGTTGTCTTGGCCTATATTGACGGGCTTGCCGATCCAAAGGTTATTGACAAAGCAAAAAAAA
GAATCAAAAAGATAAAGATTGATGCTGTCTTAGAAAGCGGATATATTGAAGAATTTATCGAAGACGACACGTACTCGCCA
TTCCCCCAGCTGCAATACACAGAAAGGCCGGACACCGTCGCCGCCCAGCTTCTCGAAGGCCGATTTGCCATTTTCACAGA
TAATACGCCCTTTGTCTTAACAGGCCCGATTACGTTTTGGCAGCTTATGCAGGCCAGTGAAGATTACTATGAGCGTTATT
TGATGTCTAACTTAATCCGCTGGCTTCGCTATATGTTTTTATTCGTTGCTTTATATTTGCCGGCTATTTATGTTGCCGTT
ATTACATACCACCAGGACTTAATGCCGACAAACTTAATGTTCAGTGTGGCCTCTGCGCGTGAACCGATTCCTTTCCCCGC
CATCATAGAAGCATTGATTATGGAAATTTCTTTTGAGGCTCTCCGTGAGGCGGGAGTGCGCCTGCCGAAAACCATCGGCC
AGACCGTCAGTATTCTCGGGGCCCTAGTCATTGGGACAGCCGCTGTTGAAGCGGGAATTGTGTCTGCCCCCATGGTGATC
ATCGTATCGTTAACAGGGATCGCGTCATTTACAATTCCGCGGTTTAACTTAGCTATCTCCATCAGGATGCTTCGTTTCCC
GCTTATGTTTTTGGCGAGTATTTTTGGGATATTCGGCATTATGCTCGGCACGATTATCTTAGTGCTTCATTTATGCAAGC
TGCAATCTTTCGGCATTCCTTATTTATCCGGGATTTCTCCGTTTAAACGAGATGAAGTAAAAGATATTTTTGTCAGGGCG
CCTTGGTGGACGATGACCAGAAGGCCGGGCACGTATTCGCGCGGCAACGGACAGAAGGGAGCGAAAAGAGAGGACCCAAA
AGATGAAGAAAACAATATATAA

Upstream 100 bases:

>100_bases
AGCGCTTTCATCCTAGTCTGGAATATATGAAACAGACAAGGTTACCCTAAAAGTCACAAGCACTTATTGAATATGACATT
AAAAAGCAGGGTGAGCCTCT

Downstream 100 bases:

>100_bases
GTGTGTTTTGCCGCTTCTCATTTGTATCCTTCTAACGGGGTGCTGGGACCGGACAGAAATCAATGACATTGCATTTGTTG
TCAGCTCAGCCATTGATAAG

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MNKRDKALQLIKELEDNQDRPISPNLKENLENLTLLTEGCSDIVFRQFDFGNGLCGFIVYIEGIVKSEHIQDHALRPFLM
HLTDQIDEHEEALQNTLSISSVALETSMSKVAASIIEGNAVLFADGHSKGLILNIKGGQRRSIEEPITESTIRGSREGFT
ESLRVNTALVRFRVKTFQLKMISFKIGTKTKTDVVLAYIDGLADPKVIDKAKKRIKKIKIDAVLESGYIEEFIEDDTYSP
FPQLQYTERPDTVAAQLLEGRFAIFTDNTPFVLTGPITFWQLMQASEDYYERYLMSNLIRWLRYMFLFVALYLPAIYVAV
ITYHQDLMPTNLMFSVASAREPIPFPAIIEALIMEISFEALREAGVRLPKTIGQTVSILGALVIGTAAVEAGIVSAPMVI
IVSLTGIASFTIPRFNLAISIRMLRFPLMFLASIFGIFGIMLGTIILVLHLCKLQSFGIPYLSGISPFKRDEVKDIFVRA
PWWTMTRRPGTYSRGNGQKGAKREDPKDEENNI

Sequences:

>Translated_513_residues
MNKRDKALQLIKELEDNQDRPISPNLKENLENLTLLTEGCSDIVFRQFDFGNGLCGFIVYIEGIVKSEHIQDHALRPFLM
HLTDQIDEHEEALQNTLSISSVALETSMSKVAASIIEGNAVLFADGHSKGLILNIKGGQRRSIEEPITESTIRGSREGFT
ESLRVNTALVRFRVKTFQLKMISFKIGTKTKTDVVLAYIDGLADPKVIDKAKKRIKKIKIDAVLESGYIEEFIEDDTYSP
FPQLQYTERPDTVAAQLLEGRFAIFTDNTPFVLTGPITFWQLMQASEDYYERYLMSNLIRWLRYMFLFVALYLPAIYVAV
ITYHQDLMPTNLMFSVASAREPIPFPAIIEALIMEISFEALREAGVRLPKTIGQTVSILGALVIGTAAVEAGIVSAPMVI
IVSLTGIASFTIPRFNLAISIRMLRFPLMFLASIFGIFGIMLGTIILVLHLCKLQSFGIPYLSGISPFKRDEVKDIFVRA
PWWTMTRRPGTYSRGNGQKGAKREDPKDEENNI
>Mature_513_residues
MNKRDKALQLIKELEDNQDRPISPNLKENLENLTLLTEGCSDIVFRQFDFGNGLCGFIVYIEGIVKSEHIQDHALRPFLM
HLTDQIDEHEEALQNTLSISSVALETSMSKVAASIIEGNAVLFADGHSKGLILNIKGGQRRSIEEPITESTIRGSREGFT
ESLRVNTALVRFRVKTFQLKMISFKIGTKTKTDVVLAYIDGLADPKVIDKAKKRIKKIKIDAVLESGYIEEFIEDDTYSP
FPQLQYTERPDTVAAQLLEGRFAIFTDNTPFVLTGPITFWQLMQASEDYYERYLMSNLIRWLRYMFLFVALYLPAIYVAV
ITYHQDLMPTNLMFSVASAREPIPFPAIIEALIMEISFEALREAGVRLPKTIGQTVSILGALVIGTAAVEAGIVSAPMVI
IVSLTGIASFTIPRFNLAISIRMLRFPLMFLASIFGIFGIMLGTIILVLHLCKLQSFGIPYLSGISPFKRDEVKDIFVRA
PWWTMTRRPGTYSRGNGQKGAKREDPKDEENNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFKQ_BACSU (O34486)

Other databases:

- EMBL:   D86417
- EMBL:   AL009126
- PIR:   C69809
- RefSeq:   NP_388660.1
- ProteinModelPortal:   O34486
- EnsemblBacteria:   EBBACT00000001535
- GeneID:   939688
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU07790
- NMPDR:   fig|224308.1.peg.779
- GenoList:   BSU07790
- GeneTree:   EBGT00070000031745
- HOGENOM:   HBG343112
- OMA:   YERSIYT
- ProtClustDB:   CLSK2460896
- BioCyc:   BSUB:BSU07790-MONOMER
- InterPro:   IPR004995

Pfam domain/function: PF03323 GerA

EC number: NA

Molecular weight: Translated: 57709; Mature: 57709

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdb0f5c4)-; HASH(0xdba9e14)-; HASH(0xdb94358)-; HASH(0xdb0f69c)-; HASH(0xd693c20)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRDKALQLIKELEDNQDRPISPNLKENLENLTLLTEGCSDIVFRQFDFGNGLCGFIVY
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHH
IEGIVKSEHIQDHALRPFLMHLTDQIDEHEEALQNTLSISSVALETSMSKVAASIIEGNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VLFADGHSKGLILNIKGGQRRSIEEPITESTIRGSREGFTESLRVNTALVRFRVKTFQLK
EEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCCHHCHHHHHHHHHHHHHEEHHHEEEE
MISFKIGTKTKTDVVLAYIDGLADPKVIDKAKKRIKKIKIDAVLESGYIEEFIEDDTYSP
EEEEEECCCCCHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FPQLQYTERPDTVAAQLLEGRFAIFTDNTPFVLTGPITFWQLMQASEDYYERYLMSNLIR
CCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
WLRYMFLFVALYLPAIYVAVITYHQDLMPTNLMFSVASAREPIPFPAIIEALIMEISFEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LREAGVRLPKTIGQTVSILGALVIGTAAVEAGIVSAPMVIIVSLTGIASFTIPRFNLAIS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHCCCCCHHHEE
IRMLRFPLMFLASIFGIFGIMLGTIILVLHLCKLQSFGIPYLSGISPFKRDEVKDIFVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHEEEC
PWWTMTRRPGTYSRGNGQKGAKREDPKDEENNI
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MNKRDKALQLIKELEDNQDRPISPNLKENLENLTLLTEGCSDIVFRQFDFGNGLCGFIVY
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHH
IEGIVKSEHIQDHALRPFLMHLTDQIDEHEEALQNTLSISSVALETSMSKVAASIIEGNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VLFADGHSKGLILNIKGGQRRSIEEPITESTIRGSREGFTESLRVNTALVRFRVKTFQLK
EEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCCHHCHHHHHHHHHHHHHEEHHHEEEE
MISFKIGTKTKTDVVLAYIDGLADPKVIDKAKKRIKKIKIDAVLESGYIEEFIEDDTYSP
EEEEEECCCCCHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FPQLQYTERPDTVAAQLLEGRFAIFTDNTPFVLTGPITFWQLMQASEDYYERYLMSNLIR
CCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
WLRYMFLFVALYLPAIYVAVITYHQDLMPTNLMFSVASAREPIPFPAIIEALIMEISFEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LREAGVRLPKTIGQTVSILGALVIGTAAVEAGIVSAPMVIIVSLTGIASFTIPRFNLAIS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHCCCCCHHHEE
IRMLRFPLMFLASIFGIFGIMLGTIILVLHLCKLQSFGIPYLSGISPFKRDEVKDIFVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHEEEC
PWWTMTRRPGTYSRGNGQKGAKREDPKDEENNI
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377