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The map label for this gene is yfmO

Identifier: 16077807

GI number: 16077807

Start: 812628

End: 813818

Strand: Direct

Name: yfmO

Synonym: BSU07400

Alternate gene names: 16077807

Gene position: 812628-813818 (Clockwise)

Preceding gene: 16077806

Following gene: 16077808

Centisome position: 19.28

GC content: 50.21

Gene sequence:

>1191_bases
ATGGATAAGACAACACAAGTGAATCAGAAAACGGGTTTGCTCAGCCAGCCAAAAGCGGTATGGGCTGTCGCGTTTGCCTG
TGTGATTTCTTTTATGGGAATCGGGCTGGTCGATCCAATTCTTCCGGCCATTGCCGCACAATTGCATGCTTCACCTAGTG
AAGTATCACTCTTGTTTACAAGTTATTTGCTTGTAACCGGATTTATGATGTTTTTCTCAGGAGCCATTTCCAGCCGCATC
GGCGCGAAATGGACATTAATTCTCGGACTTATTTTTATTATTGTGTTTGCGGGGCTTGGCGGCAGCTCAAGCTCAATCGC
TCAGTTAGTCGGCTATCGCGGCGGCTGGGGATTAGGGAATGCTTTGTTTATTTCAACAGCGCTTGCGGTCATCGTTGGCG
TGTCAGTCGGCGGCAGCGCCCAAGCGATTATTTTGTATGAGGCCGCGCTCGGTCTCGGGATTTCTGTCGGGCCGCTTGCA
GGCGGAGAGCTCGGAAGCATTTCATGGCGCGCACCGTTTTTTGGAGTATCTGTCCTGATGTTTATTGCGTTAATCGCGAT
TTCTTTCATGCTTCCGAAGCTGCCGAAACCGGCGAAACGCGTCGGTGTGTTTGATGCGATGAAGGCACTCAAATATAAAG
GCCTGCTGACAATGGCGGTATCGGCATTCCTATACAACTTTGGATTTTTTATTTTGCTAGCTTATTCTCCGTTCGTACTG
GATTTAGATGAACACGGTCTTGGATATGTCTTCTTCGGCTGGGGCCTTCTGCTGGCGATTACGTCAGTCTTTACGGCGCC
GCTCGTGCACAAAGCGCTGGGCACAGTGCGTTCGCTAGTCGTTCTCTTTATCGCCTTTGCGGCCATTCTCGTTATTATGG
GGATCTGGACAGACCATCAGACTTTGATTATTACATGTATCGTTGTCGCTGGTGCTGTCCTCGGTATGGTGAATACGATC
ATGACAACCGCTGTGATGGGTTCTGCGCCGGTTGAACGTTCAATCGCGTCTTCAGCCTACAGCTCAGTCCGCTTCATCGG
CGGCGCGCTCGCCCCGTGGATTGCAGGAATGCTGTCAGAACACTTTACTGCAAGCACACCATATACAGTAGGCGGAATCG
TCGTTTTTGTCGGCATGCTTGTCCTTCTCATGGGACGTAAACATCTTGCTGGAATTAAGGCGGGGCATTAA

Upstream 100 bases:

>100_bases
GCAAAGCGGAACGCGCCATTCAATCAATCGAATGAAAAGTTTGTTAAACGCTATTTTTGTAGCGTTTCTTTTAATGGAAT
AAAGATGGAGGTTAGGTCAA

Downstream 100 bases:

>100_bases
TAACGAAAGACACTGCGCATATGCAGTGTCTTTTTATTCGTTATAATGCATCATAATCGAATTGGTGCAGGAAAGGACAA
CCTTTATGACACAATTTTAC

Product: metal efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFTSYLLVTGFMMFFSGAISSRI
GAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLA
GGELGSISWRAPFFGVSVLMFIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVL
DLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQTLIITCIVVAGAVLGMVNTI
MTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH

Sequences:

>Translated_396_residues
MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFTSYLLVTGFMMFFSGAISSRI
GAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLA
GGELGSISWRAPFFGVSVLMFIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVL
DLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQTLIITCIVVAGAVLGMVNTI
MTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH
>Mature_396_residues
MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFTSYLLVTGFMMFFSGAISSRI
GAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLA
GGELGSISWRAPFFGVSVLMFIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVL
DLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQTLIITCIVVAGAVLGMVNTI
MTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH

Specific function: Acts to efflux copper or a copper complex. It is possible that yfmO could contribute to copper resistance

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFMO_BACSU (O06473)

Other databases:

- EMBL:   D86418
- EMBL:   AL009126
- PIR:   F69813
- RefSeq:   NP_388621.1
- ProteinModelPortal:   O06473
- EnsemblBacteria:   EBBACT00000001874
- GeneID:   936111
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU07400
- NMPDR:   fig|224308.1.peg.740
- GenoList:   BSU07400
- GeneTree:   EBGT00070000031854
- HOGENOM:   HBG292497
- OMA:   LGNISWR
- ProtClustDB:   CLSK878547
- BioCyc:   BSUB:BSU07400-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958
- PRINTS:   PR01035

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 41451; Mature: 41451

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdb773ac)-; HASH(0xd18109c)-; HASH(0xda8bfe4)-; HASH(0xd7554e8)-; HASH(0xd9a0470)-; HASH(0xd92f390)-; HASH(0xdda2618)-; HASH(0xcb02178)-; HASH(0xcc12528)-; HASH(0xc8fcf34)-; HASH(0xbf41e78)-; HASH(0xd315c00)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFT
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SYLLVTGFMMFFSGAISSRIGAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCH
ALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLAGGELGSISWRAPFFGVSVLM
HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHH
FIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
DLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQ
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TLIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH
HCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCH
>Mature Secondary Structure
MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFT
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SYLLVTGFMMFFSGAISSRIGAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCH
ALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLAGGELGSISWRAPFFGVSVLM
HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHH
FIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
DLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQ
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TLIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH
HCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377