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The map label for this gene is ydfK

Identifier: 16077612

GI number: 16077612

Start: 593407

End: 594096

Strand: Reverse

Name: ydfK

Synonym: BSU05450

Alternate gene names: 16077612

Gene position: 594096-593407 (Counterclockwise)

Preceding gene: 16077613

Following gene: 16077611

Centisome position: 14.09

GC content: 41.45

Gene sequence:

>690_bases
ATGTTTGGAACGATTTTTAACACAGTGATGATCATTGCAGGAAGCATAATCGGGGGGATATTCAAAAAAGGCATTAAAGA
TGAATACCAGGATATTTTGATGCAGGCAATGGGATTCGCTGCGGTCGCACTGGGGATCAACGCCATTACACAGCATTTGC
CTGATAGTAAATACCCCATTCTATTCATCGTGAGTTTAGCCATTGGAGGTTTGCTAGGCCAGATCATCAATTTAGAATTA
CGATTCAACAAGCTGGTGAACAAATTTTCTAAAAGCAATTTAGCAGAGGGCTTATCAACTGCGGTCTTATTATTTTGTAT
AGGTTCGCTGTCAATATTAGGCCCTGTTGAAGCCGCTTTGCATGGAGATTATACATACCTTCTGACAAACGGGATGTTAG
ATGGGATCACCTCCATTGTGCTCGCTTCAACTTTTGGTTTTGGAATAGCGGCTGCCGCACTTGTATTATTTTCCTGGCAG
GGCTCCATCTATTTATTTGCACAAGTAATGGAGAGCGCAATCAATACAGACCTTATTAATGAAATCACAATTGTGGGAGG
CATACTCATCCTCAGTTCAGGTCTAAGCATTCTTGGAATCAAGAAGTTCAAAACACTGAATCTGCTGCCTTCCCTCCTGA
TCCCTCCTGTTGTGATTTTTGTGATTCATGCATTTGGATTGCGGTTTTAA

Upstream 100 bases:

>100_bases
CCATCAAATAATCTCATGAATATGTTTTGATCTCCCTTGACTCTCTACTAACTAGAGGGTTTATTTTTTATGCAGGAATG
ATTTTTGGAGGAGAAAGCTT

Downstream 100 bases:

>100_bases
TGAAGCGGCTCCACAAAGGAGGTTAATATTCTGTTATATTGATTTTCAATAATCTGTTTCAATCGTTTTTTTCCTTTTCA
TCTTGGATTTGACGTCTAAT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MFGTIFNTVMIIAGSIIGGIFKKGIKDEYQDILMQAMGFAAVALGINAITQHLPDSKYPILFIVSLAIGGLLGQIINLEL
RFNKLVNKFSKSNLAEGLSTAVLLFCIGSLSILGPVEAALHGDYTYLLTNGMLDGITSIVLASTFGFGIAAAALVLFSWQ
GSIYLFAQVMESAINTDLINEITIVGGILILSSGLSILGIKKFKTLNLLPSLLIPPVVIFVIHAFGLRF

Sequences:

>Translated_229_residues
MFGTIFNTVMIIAGSIIGGIFKKGIKDEYQDILMQAMGFAAVALGINAITQHLPDSKYPILFIVSLAIGGLLGQIINLEL
RFNKLVNKFSKSNLAEGLSTAVLLFCIGSLSILGPVEAALHGDYTYLLTNGMLDGITSIVLASTFGFGIAAAALVLFSWQ
GSIYLFAQVMESAINTDLINEITIVGGILILSSGLSILGIKKFKTLNLLPSLLIPPVVIFVIHAFGLRF
>Mature_229_residues
MFGTIFNTVMIIAGSIIGGIFKKGIKDEYQDILMQAMGFAAVALGINAITQHLPDSKYPILFIVSLAIGGLLGQIINLEL
RFNKLVNKFSKSNLAEGLSTAVLLFCIGSLSILGPVEAALHGDYTYLLTNGMLDGITSIVLASTFGFGIAAAALVLFSWQ
GSIYLFAQVMESAINTDLINEITIVGGILILSSGLSILGIKKFKTLNLLPSLLIPPVVIFVIHAFGLRF

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDFK_BACSU (P96689)

Other databases:

- EMBL:   AB001488
- EMBL:   AL009126
- PIR:   A69781
- RefSeq:   NP_388426.1
- ProteinModelPortal:   P96689
- EnsemblBacteria:   EBBACT00000003390
- GeneID:   939896
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU05450
- NMPDR:   fig|224308.1.peg.545
- GenoList:   BSU05450
- GeneTree:   EBGT00050000004172
- HOGENOM:   HBG727799
- OMA:   WQGSIYL
- ProtClustDB:   CLSK447376
- BioCyc:   BSUB:BSU05450-MONOMER
- InterPro:   IPR007563

Pfam domain/function: PF04474 DUF554

EC number: NA

Molecular weight: Translated: 24412; Mature: 24412

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcb9f46c)-; HASH(0xcdcaae8)-; HASH(0xd19dcf4)-; HASH(0xca98634)-; HASH(0xd530c60)-; HASH(0xbc7c3c8)-; HASH(0xcc8f898)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGTIFNTVMIIAGSIIGGIFKKGIKDEYQDILMQAMGFAAVALGINAITQHLPDSKYPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LFIVSLAIGGLLGQIINLELRFNKLVNKFSKSNLAEGLSTAVLLFCIGSLSILGPVEAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGDYTYLLTNGMLDGITSIVLASTFGFGIAAAALVLFSWQGSIYLFAQVMESAINTDLIN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EITIVGGILILSSGLSILGIKKFKTLNLLPSLLIPPVVIFVIHAFGLRF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MFGTIFNTVMIIAGSIIGGIFKKGIKDEYQDILMQAMGFAAVALGINAITQHLPDSKYPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LFIVSLAIGGLLGQIINLELRFNKLVNKFSKSNLAEGLSTAVLLFCIGSLSILGPVEAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGDYTYLLTNGMLDGITSIVLASTFGFGIAAAALVLFSWQGSIYLFAQVMESAINTDLIN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EITIVGGILILSSGLSILGIKKFKTLNLLPSLLIPPVVIFVIHAFGLRF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377