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The map label for this gene is yczJ

Identifier: 16077480

GI number: 16077480

Start: 463496

End: 463783

Strand: Reverse

Name: yczJ

Synonym: BSU04130

Alternate gene names: 16077480

Gene position: 463783-463496 (Counterclockwise)

Preceding gene: 16077485

Following gene: 255767127

Centisome position: 11.0

GC content: 47.22

Gene sequence:

>288_bases
ATGGTCAGAGAGGCAGCAATGCTTCACATTAAAGAAGGCCTTGAACAAGAGTTTGAGGATGCATTCCGGCAAGCTGCGCC
GATTATTTCCGGCATGAAGGGCTATATCACTCACTCGTTATCAAAATGCATGGAGGAAACGCATAAATATCTGCTTCTTG
TGGAGTGGGAAACACTTGAGGACCATACGGAAGGCTTTCGCGGTTCTTCAGAGTATCAAGAGTGGAAAGCCTTGCTTCAT
CGGTTCTATACCCCGTTCCCGACGGTCGAGCATTTTCAGGATGTGTAA

Upstream 100 bases:

>100_bases
TGCAAGATTTTTTTGAAAATGAAGGAAAAGTTCACCGATTTTGCAGAAATCTCCTATCGTTTGCTGTAGACTATTTGAAA
AGACAGAAAGAAGGGATAGC

Downstream 100 bases:

>100_bases
TAGATTTATATAATATGAAGTGTAAAACCGATAAGGGAGACAGACCATACAAAAACGGCGGTATAAATATTAAAAGCGCC
TGAGCCGTCATTTTCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MVREAAMLHIKEGLEQEFEDAFRQAAPIISGMKGYITHSLSKCMEETHKYLLLVEWETLEDHTEGFRGSSEYQEWKALLH
RFYTPFPTVEHFQDV

Sequences:

>Translated_95_residues
MVREAAMLHIKEGLEQEFEDAFRQAAPIISGMKGYITHSLSKCMEETHKYLLLVEWETLEDHTEGFRGSSEYQEWKALLH
RFYTPFPTVEHFQDV
>Mature_95_residues
MVREAAMLHIKEGLEQEFEDAFRQAAPIISGMKGYITHSLSKCMEETHKYLLLVEWETLEDHTEGFRGSSEYQEWKALLH
RFYTPFPTVEHFQDV

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCZJ_BACSU (O31484)

Other databases:

- EMBL:   AL009126
- PIR:   H69767
- RefSeq:   NP_388294.1
- ProteinModelPortal:   O31484
- SMR:   O31484
- EnsemblBacteria:   EBBACT00000000104
- GeneID:   938254
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU04130
- NMPDR:   fig|224308.1.peg.413
- GenoList:   BSU04130
- GeneTree:   EBGT00050000002022
- HOGENOM:   HBG482142
- OMA:   LLHHFYD
- ProtClustDB:   CLSK2518200
- BioCyc:   BSUB:BSU04130-MONOMER
- GO:   GO:0005737
- InterPro:   IPR007138
- InterPro:   IPR011008

Pfam domain/function: PF03992 ABM; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 11221; Mature: 11221

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVREAAMLHIKEGLEQEFEDAFRQAAPIISGMKGYITHSLSKCMEETHKYLLLVEWETLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHH
DHTEGFRGSSEYQEWKALLHRFYTPFPTVEHFQDV
HHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MVREAAMLHIKEGLEQEFEDAFRQAAPIISGMKGYITHSLSKCMEETHKYLLLVEWETLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHH
DHTEGFRGSSEYQEWKALLHRFYTPFPTVEHFQDV
HHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377