Click here to switch to the map view.

The map label for this gene is glpQ

Identifier: 16077282

GI number: 16077282

Start: 233014

End: 233895

Strand: Reverse

Name: glpQ

Synonym: BSU02130

Alternate gene names: 16077282

Gene position: 233895-233014 (Counterclockwise)

Preceding gene: 16077283

Following gene: 16077280

Centisome position: 5.55

GC content: 45.46

Gene sequence:

>882_bases
ATGAGAAAAAATAGAATACTGGCCTTGTTTGTTCTGTCGCTGGGCTTACTCTCATTTATGGTAACGCCAGTGTCGGCAGC
GTCAAAAGGAAACCTGCTGTCACCTGACCGTATCCTGACCGTCGCGCACAGAGGGGCTTCTGGATATGTGCCTGAGCACA
CGATTCTGTCTTACGAAACCGCTCAGAAAATGAAAGCTGATTTTATTGAATTGGATCTGCAAATGACAAAAGACGGAAAA
TTGATTGTCATGCATGACGAAAAACTGGACCGCACCACAAACGGAATGGGTTGGGTGAAAGACCATACGCTCGCAGACAT
TAAGAAGCTTGACGCCGGTTCTTGGTTTAATGAAGCCTATCCGGAAAAAGCAAAGCCGCAGTACGTCGGCCTTAAAGTTC
CTACATTAGAAGAGGTATTAGACCGTTTCGGAAAGCACGCGAACTACTACATTGAAACAAAATCGCCTGACACCTACCCA
GGTATGGAAGAAAAACTGATCGCTTCTTTGCAGAAACATAAATTACTGGGAAAGCATTCTAAGCCAGGCCAGGTGATCAT
TCAATCGTTCAGCAAAGAAAGCCTGGTAAAAGTCCATCAATTACAGCCAAACCTGCCGACCGTTCAATTGCTGGAAGCCA
AACAAATGGCGTCAATGACAGATGCTGCCCTGGAAGAAATCAAAACATACGCTGTCGGTGCGGGCCCGGATTATAAAGCT
TTAAATCAAGAAAACGTCCGTATGATCCGCAGCCACGGCCTCCTGCTTCATCCTTACACAGTCAATAATGAAGCTGATAT
GCATCGCCTGCTTGATTGGGGCGTAACAGGAGTGTTCACCAACTATCCTGATCTTTTCCACAAAGTAAAAAAGGGTTATT
AA

Upstream 100 bases:

>100_bases
AAGAAAGACACATAAAAGATTAATAGTTTTCCAACACGCCGTTTACATCCGTTTTTTATTATGAAAGACAGGTAGTGCTT
ATCTATAAGGAGGAGAAATC

Downstream 100 bases:

>100_bases
AAGCAAAAAACCTTGCGACAACTATCGCAAGGTTTTCTTCTATATTTTATTCTTTTCCGGCAGCAGCTTCTGACTGTCCA
TTAAGCAGCTGAGAATTTAT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGK
LIVMHDEKLDRTTNGMGWVKDHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKSPDTYP
GMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKA
LNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKVKKGY

Sequences:

>Translated_293_residues
MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGK
LIVMHDEKLDRTTNGMGWVKDHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKSPDTYP
GMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKA
LNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKVKKGY
>Mature_293_residues
MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGK
LIVMHDEKLDRTTNGMGWVKDHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKSPDTYP
GMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKA
LNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKVKKGY

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family

Homologues:

Organism=Homo sapiens, GI7706617, Length=140, Percent_Identity=37.1428571428571, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI1788572, Length=341, Percent_Identity=29.0322580645161, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789858, Length=247, Percent_Identity=29.9595141700405, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17542344, Length=305, Percent_Identity=26.5573770491803, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLPQ_BACSU (P37965)

Other databases:

- EMBL:   Z26522
- EMBL:   AB006424
- EMBL:   AL009126
- PIR:   I40418
- RefSeq:   NP_388095.1
- ProteinModelPortal:   P37965
- SMR:   P37965
- EnsemblBacteria:   EBBACT00000000131
- GeneID:   938446
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU02130
- NMPDR:   fig|224308.1.peg.214
- GenoList:   BSU02130
- GeneTree:   EBGT00050000000804
- HOGENOM:   HBG725117
- OMA:   WFNKAYP
- PhylomeDB:   P37965
- ProtClustDB:   CLSK886606
- BioCyc:   BSUB:BSU02130-MONOMER
- BRENDA:   3.1.4.46
- InterPro:   IPR004129
- InterPro:   IPR017946
- Gene3D:   G3DSA:3.20.20.190
- PANTHER:   PTHR23344

Pfam domain/function: PF03009 GDPD; SSF51695 PLC-like_Pdiesterase_TIM-brl

EC number: =3.1.4.46

Molecular weight: Translated: 32960; Mature: 32960

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYVPEHTILSYET
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHH
AQKMKADFIELDLQMTKDGKLIVMHDEKLDRTTNGMGWVKDHTLADIKKLDAGSWFNEAY
HHHHHHHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCC
PEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKSPDTYPGMEEKLIASLQKHKLLGKHS
CCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
KPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKA
CCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKVKKGY
CCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYVPEHTILSYET
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHH
AQKMKADFIELDLQMTKDGKLIVMHDEKLDRTTNGMGWVKDHTLADIKKLDAGSWFNEAY
HHHHHHHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCC
PEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKSPDTYPGMEEKLIASLQKHKLLGKHS
CCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
KPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKA
CCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKVKKGY
CCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377