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The map label for this gene is yaaH

Identifier: 16077084

GI number: 16077084

Start: 23868

End: 25151

Strand: Reverse

Name: yaaH

Synonym: BSU00160

Alternate gene names: 16077084

Gene position: 25151-23868 (Counterclockwise)

Preceding gene: 16077085

Following gene: 16077083

Centisome position: 0.6

GC content: 45.95

Gene sequence:

>1284_bases
GTGGTAAAACAAGGCGACACTCTTTCTGCTATCGCTTCACAATACAGAACAACCACAAATGACATCACTGAAACGAATGA
AATACCGAATCCCGACAGCCTTGTTGTCGGACAAACCATTGTCATTCCAATAGCTGGCCAGTTCTATGATGTGAAGCGAG
GTGATACCCTGACATCCATCGCCCGGCAGTTCAATACAACAGCAGCCGAGCTCGCAAGGGTTAACCGCATCCAGTTAAAT
ACCGTGCTTCAGATTGGTTTCCGTTTATACATCCCTCCAGCTCCTAAACGAGACATCGAATCAAATGCTTATTTGGAGCC
CCGAGGAAATCAAGTCAGCGAAAATCTCCAGCAGGCGGCCAGAGAAGCGTCGCCCTACTTAACTTACCTTGGCGCATTCA
GCTTCCAGGCACAGCGGAACGGAACCTTAGTCGCACCGCCTTTAACGAATTTAAGGAGCATTACAGAAAGTCAAAATACA
ACATTGATGATGATTATAACGAACCTAGAAAACCAGGCATTCAGCGATGAACTTGGCCGGATCCTTTTGAACGACGAAAC
TGTAAAAAGACGGCTTCTAAATGAAATAGTCGAGAATGCCAGAAGATATGGCTTCCGTGACATTCATTTCGACTTTGAAT
ATTTGCGGCCCCAGGATAGAGAGGCCTATAATCAATTCCTCCGCGAAGCAAGGGATCTTTTCCATCGAGAGGGCTTAGAA
ATTTCTACGGCTCTTGCTCCTAAAACAAGTGCAACACAGCAGGGCAGGTGGTATGAAGCTCATGATTACAGGGCACATGG
CGAAATTGTCGACTTTGTTGTTCTCATGACATATGAATGGGGCTATAGCGGCGGACCGCCTCAAGCGGTTTCTCCAATTG
GACCTGTCCGTGATGTCATAGAATATGCTTTGACTGAAATGCCTGCGAACAAAATTGTCATGGGCCAGAATTTATATGGA
TATGACTGGACGCTGCCATATACAGCAGGGGGAACTCCAGCAAGAGCAGTAAGCCCTCAGCAAGCCATTGTCATAGCTGA
TCAGAACAATGCTTCCATTCAGTATGACCAAACCGCTCAAGCTCCTTTCTTCCGCTATACTGATGCAGAAAACAGAAGGC
ACGAGGTATGGTTCGAGGATGCCCGCTCGATTCAAGCAAAATTCAATCTGATTAAAGAGCTGAATTTAAGAGGCATCAGC
TATTGGAAGCTGGGTCTTTCCTTTCCACAAAACTGGCTGCTGCTGTCTGATCAATTTAATGTTGTCAAAAAGACGTTTCG
ATAA

Upstream 100 bases:

>100_bases
TACGACGGAAGAACAAATTATAGAAAAATAAACATGATCAGCGCTTTTCTTTCATACATTGATAGCGATATGAAAGGAGG
CGTTTTTCATTCAAATTTAT

Downstream 100 bases:

>100_bases
TTTGGAAACGTCTTTTTTTCATGGGGGCACCCAAGGGTTGTGATACAATATGAAGGTCGGTAACTGACGCACGTTTTTCA
GATATAAGGAGGATTCCGAT

Product: spore peptidoglycan hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLN
TVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTLVAPPLTNLRSITESQNT
TLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLE
ISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDVIEYALTEMPANKIVMGQNLYG
YDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGIS
YWKLGLSFPQNWLLLSDQFNVVKKTFR

Sequences:

>Translated_427_residues
MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLN
TVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTLVAPPLTNLRSITESQNT
TLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLE
ISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDVIEYALTEMPANKIVMGQNLYG
YDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGIS
YWKLGLSFPQNWLLLSDQFNVVKKTFR
>Mature_427_residues
MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLN
TVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTLVAPPLTNLRSITESQNT
TLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLE
ISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDVIEYALTEMPANKIVMGQNLYG
YDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGIS
YWKLGLSFPQNWLLLSDQFNVVKKTFR

Specific function: May be required for the L-alanine-stimulated germination pathway

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YAAH_BACSU (P37531)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S66046
- RefSeq:   NP_387897.1
- ProteinModelPortal:   P37531
- EnsemblBacteria:   EBBACT00000003011
- GeneID:   937029
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU00160
- NMPDR:   fig|224308.1.peg.16
- GenoList:   BSU00160
- GeneTree:   EBGT00050000000551
- HOGENOM:   HBG337948
- OMA:   WYEAHDY
- ProtClustDB:   CLSK873277
- BioCyc:   BSUB:BSU00160-MONOMER
- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482
- Gene3D:   G3DSA:3.20.20.80
- SMART:   SM00636
- SMART:   SM00257

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM; SSF51445 Glyco_hydro_cat

EC number: NA

Molecular weight: Translated: 48637; Mature: 48637

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSI
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCEEECCCCCHHHHH
ARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAA
HHHHCCHHHHHHHHHHHHHHHHEEECEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHH
REASPYLTYLGAFSFQAQRNGTLVAPPLTNLRSITESQNTTLMMIITNLENQAFSDELGR
HHCCCCEEEHHCEEEEECCCCCEECCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCE
ILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLE
EEECHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
ISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDVI
EEEECCCCCCCCCCCCCEECCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCHHHHHHH
EYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQ
HHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC
APFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFN
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCHH
VVKKTFR
HHHHHCC
>Mature Secondary Structure
MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSI
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCEEECCCCCHHHHH
ARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAA
HHHHCCHHHHHHHHHHHHHHHHEEECEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHH
REASPYLTYLGAFSFQAQRNGTLVAPPLTNLRSITESQNTTLMMIITNLENQAFSDELGR
HHCCCCEEEHHCEEEEECCCCCEECCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCE
ILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLE
EEECHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
ISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDVI
EEEECCCCCCCCCCCCCEECCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCHHHHHHH
EYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQ
HHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC
APFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFN
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCHH
VVKKTFR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957