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The map label for this gene is lcrH_2

Identifier: 15618929

GI number: 15618929

Start: 1173695

End: 1174213

Strand: Reverse

Name: lcrH_2

Synonym: CPn1021

Alternate gene names: NA

Gene position: 1174213-1173695 (Counterclockwise)

Preceding gene: 15618930

Following gene: 15618928

Centisome position: 95.45

GC content: 36.8

Gene sequence:

>519_bases
ATGTCACATTTAAATTATTTACTAGAAAAAATCGCTGCATCTTCCAAGGAAGACTTCCCTTTCCCAGATGATTTGGAAAG
CTATTTGGAAGGATATGTCCCGGATAAAAATATAGCTTTAGATACCTACCAAAAGATCTTCAAGATATCCTCCGAGGATC
TTGAAAAAGTATATAAAGAGGGTTATCACGCCTATCTCGACAAAGACTATGCTAAAAGCATCACCGTTTTTCGCTGGTTA
GTTTTCTTCAATCCTTTTGTCTCTAAGTTTTGGTTTTCTTTAGGTGCCTCTCTACATATGTCCGAACAATATTCACAAGC
TTTGCATGCCTATGGAGTCACTGCAGTCCTTCGAGATAAAGATCCCTATCCTCATTACTATGCCTACATATGCTATACTC
TTACAAATGAACATGAAGAAGCTGAAAAAGCTTTAGAAATGGCGTGGGTACGTGCACAACACAAGCCCCTCTATAATGAA
TTGAAAGAAGAAATTCTAGATATTCGAAAACATAAATAA

Upstream 100 bases:

>100_bases
GGCACCTCCAAGAGATTTCTCAATGTCATCAAGCGCGCTCTAATGTATTGAAGTTATTGAAAGAACTTATGGACACCTTC
ATTTACAACCTACGCCCCTA

Downstream 100 bases:

>100_bases
TGTGGAAACTCAACTATGTCCTCTTGGTTATCTCAAGCAAGTGAGGTTCTTCTCAATCAAGATCCTTATATCCCTGATGC
TCCTAGGTCACAAGAATCTT

Product: low calcium response protein H

Products: NA

Alternate protein names: Type III Secretion Chaperone; Low Calcium Response Protein H; TPR Repeat-Containing Protein; Type III Secretion Chaperone Low Calcium Response Protein H; Chaperone SycD

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSHLNYLLEKIAASSKEDFPFPDDLESYLEGYVPDKNIALDTYQKIFKISSEDLEKVYKEGYHAYLDKDYAKSITVFRWL
VFFNPFVSKFWFSLGASLHMSEQYSQALHAYGVTAVLRDKDPYPHYYAYICYTLTNEHEEAEKALEMAWVRAQHKPLYNE
LKEEILDIRKHK

Sequences:

>Translated_172_residues
MSHLNYLLEKIAASSKEDFPFPDDLESYLEGYVPDKNIALDTYQKIFKISSEDLEKVYKEGYHAYLDKDYAKSITVFRWL
VFFNPFVSKFWFSLGASLHMSEQYSQALHAYGVTAVLRDKDPYPHYYAYICYTLTNEHEEAEKALEMAWVRAQHKPLYNE
LKEEILDIRKHK
>Mature_171_residues
SHLNYLLEKIAASSKEDFPFPDDLESYLEGYVPDKNIALDTYQKIFKISSEDLEKVYKEGYHAYLDKDYAKSITVFRWLV
FFNPFVSKFWFSLGASLHMSEQYSQALHAYGVTAVLRDKDPYPHYYAYICYTLTNEHEEAEKALEMAWVRAQHKPLYNEL
KEEILDIRKHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20385; Mature: 20254

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLNYLLEKIAASSKEDFPFPDDLESYLEGYVPDKNIALDTYQKIFKISSEDLEKVYKE
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
GYHAYLDKDYAKSITVFRWLVFFNPFVSKFWFSLGASLHMSEQYSQALHAYGVTAVLRDK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCC
DPYPHYYAYICYTLTNEHEEAEKALEMAWVRAQHKPLYNELKEEILDIRKHK
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHLNYLLEKIAASSKEDFPFPDDLESYLEGYVPDKNIALDTYQKIFKISSEDLEKVYKE
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
GYHAYLDKDYAKSITVFRWLVFFNPFVSKFWFSLGASLHMSEQYSQALHAYGVTAVLRDK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCC
DPYPHYYAYICYTLTNEHEEAEKALEMAWVRAQHKPLYNELKEEILDIRKHK
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA