| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618928
GI number: 15618928
Start: 1172147
End: 1173679
Strand: Reverse
Name: Not Available
Synonym: CPn1020
Alternate gene names: NA
Gene position: 1173679-1172147 (Counterclockwise)
Preceding gene: 15618929
Following gene: 15618927
Centisome position: 95.4
GC content: 39.14
Gene sequence:
>1533_bases ATGTCCTCTTGGTTATCTCAAGCAAGTGAGGTTCTTCTCAATCAAGATCCTTATATCCCTGATGCTCCTAGGTCACAAGA ATCTTCGGTTCCTAAGATTAGCTATTCTATCACTGTAGCGCCTCAAGAAGCTCAAAAGTCTCTTCCCAAGTTTTTCACTC AGAAATTTCAGTCACAATGTAAGTCTGAGCCTCCTATCACCCATCATAAAACATTCATTATTGCAACACCAAGAGAGAGA ATCTTGCGTTTCGGCAGCTCTTTCGAATCTCAACTTCACAACACATCGCAAGCTCAAACTTCATCTCCTTGGAATCTTTT TTCTCAAAAAAATAGCACAGAAGCAAGTAAAGCTCTGATGCAAGAACTGACTATGCCAAAATCTCCGGAGAAAACTTCAG AGAAGGCTCTAGATAAAAACCTGAGTTCTAAACAAGAAGGCTCTTGCAAAAATTTTGATACGCTGCACCTACAACAACAT CTCAAGTTGTTTGGAACCGTTGACTCGCTATATTCTCAAAGCCTAGATAGTGAACAGCAAGAACTCCTCCAATCACGAAG AGAAGAGCGCAGTGAAACCTATGCAAACCAGCAGAGTTCTGAGAAAAAAATAGAAACCAAAGTTCAGATAAAAGATCTCT GTAAAGACCTCTTTTCTCAGGATCAGGATTCCAATCAAAAACAAAAGAAATCCCCTTTCCAACAAGATACATCACGTAAA AATAGAATAGCCAAAGCAGCACAAGCTGTTCCTGTAATTCCTCCTCCAAGCATAGGAGTGTTTACATTGAGCTATCTACT CACAAAACAAGGGATTCTTTCAGACTTTTCTTCGTATGGATGCCACAAAGATTCCGTGGAGTCGACACAACGAGAGCTCG ATGCTCTACATGAAAAGAGAATCGAGACTATCAAGGTCAGCATCGAGAAAGAAAAACGAGAAAGATTATGGGGATCTCTT TCTGACATTATCGGTTGGCTAGCTCCGTTTGTTTCTATAGGGATCGGCATTGTTGCTATCTTGAGTGGAGGCGGTATCTT TGCTTTTGCAGGTTTTTTTGCAGGGCTAATTTCTCTTGTTATCAAGTGTTTAGAGAAACTAAAGTTCTGGGATTGGCTAG AAAAACATCTGCCTATAAAAAATGAAGAACTAAGACGAAAAATTATAACCATAATCCAGTGGGTCGTCTATTTAACCCCT GTCATTCTCTCCATATGCACATTAAAAGTAGAAAATTTAGGTTTTTCCCCTATTATAGAAGGAGCTATTAAAGGAATCCA ACCCGCGATAGAATCTACGATGGCTGCTTTAAGATGCGCTATACTGTTTTCTCAAGCAGAAATCTATAAACTCAAAGGAA AACTCACTAAAATCCAACTCGACATTGAATTGAAAAGTTTTGATAGGGACGATCATTACGAACGTTCTCAAGAACTTTTA GATAACATGGAGAGTTCTTTCGAAGCCCTTTCAAGAATCTTAAATTACATGCGTGAACTAGATCAAGTGTATCTCCACTC CTTAAGAGGATAA
Upstream 100 bases:
>100_bases AGAAATGGCGTGGGTACGTGCACAACACAAGCCCCTCTATAATGAATTGAAAGAAGAAATTCTAGATATTCGAAAACATA AATAATGTGGAAACTCAACT
Downstream 100 bases:
>100_bases ATCCACAGAAGAAATATTATGACTGTATCTTACCAATCCATATCGACTCCTCCTCCTGAAGGAGAGTTTGATATTTTTGT AGATGGAAATGCCACTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MSSWLSQASEVLLNQDPYIPDAPRSQESSVPKISYSITVAPQEAQKSLPKFFTQKFQSQCKSEPPITHHKTFIIATPRER ILRFGSSFESQLHNTSQAQTSSPWNLFSQKNSTEASKALMQELTMPKSPEKTSEKALDKNLSSKQEGSCKNFDTLHLQQH LKLFGTVDSLYSQSLDSEQQELLQSRREERSETYANQQSSEKKIETKVQIKDLCKDLFSQDQDSNQKQKKSPFQQDTSRK NRIAKAAQAVPVIPPPSIGVFTLSYLLTKQGILSDFSSYGCHKDSVESTQRELDALHEKRIETIKVSIEKEKRERLWGSL SDIIGWLAPFVSIGIGIVAILSGGGIFAFAGFFAGLISLVIKCLEKLKFWDWLEKHLPIKNEELRRKIITIIQWVVYLTP VILSICTLKVENLGFSPIIEGAIKGIQPAIESTMAALRCAILFSQAEIYKLKGKLTKIQLDIELKSFDRDDHYERSQELL DNMESSFEALSRILNYMRELDQVYLHSLRG
Sequences:
>Translated_510_residues MSSWLSQASEVLLNQDPYIPDAPRSQESSVPKISYSITVAPQEAQKSLPKFFTQKFQSQCKSEPPITHHKTFIIATPRER ILRFGSSFESQLHNTSQAQTSSPWNLFSQKNSTEASKALMQELTMPKSPEKTSEKALDKNLSSKQEGSCKNFDTLHLQQH LKLFGTVDSLYSQSLDSEQQELLQSRREERSETYANQQSSEKKIETKVQIKDLCKDLFSQDQDSNQKQKKSPFQQDTSRK NRIAKAAQAVPVIPPPSIGVFTLSYLLTKQGILSDFSSYGCHKDSVESTQRELDALHEKRIETIKVSIEKEKRERLWGSL SDIIGWLAPFVSIGIGIVAILSGGGIFAFAGFFAGLISLVIKCLEKLKFWDWLEKHLPIKNEELRRKIITIIQWVVYLTP VILSICTLKVENLGFSPIIEGAIKGIQPAIESTMAALRCAILFSQAEIYKLKGKLTKIQLDIELKSFDRDDHYERSQELL DNMESSFEALSRILNYMRELDQVYLHSLRG >Mature_509_residues SSWLSQASEVLLNQDPYIPDAPRSQESSVPKISYSITVAPQEAQKSLPKFFTQKFQSQCKSEPPITHHKTFIIATPRERI LRFGSSFESQLHNTSQAQTSSPWNLFSQKNSTEASKALMQELTMPKSPEKTSEKALDKNLSSKQEGSCKNFDTLHLQQHL KLFGTVDSLYSQSLDSEQQELLQSRREERSETYANQQSSEKKIETKVQIKDLCKDLFSQDQDSNQKQKKSPFQQDTSRKN RIAKAAQAVPVIPPPSIGVFTLSYLLTKQGILSDFSSYGCHKDSVESTQRELDALHEKRIETIKVSIEKEKRERLWGSLS DIIGWLAPFVSIGIGIVAILSGGGIFAFAGFFAGLISLVIKCLEKLKFWDWLEKHLPIKNEELRRKIITIIQWVVYLTPV ILSICTLKVENLGFSPIIEGAIKGIQPAIESTMAALRCAILFSQAEIYKLKGKLTKIQLDIELKSFDRDDHYERSQELLD NMESSFEALSRILNYMRELDQVYLHSLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57918; Mature: 57787
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSWLSQASEVLLNQDPYIPDAPRSQESSVPKISYSITVAPQEAQKSLPKFFTQKFQSQC CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH KSEPPITHHKTFIIATPRERILRFGSSFESQLHNTSQAQTSSPWNLFSQKNSTEASKALM CCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHCCHHHCCCCCHHHHHCCCCHHHHHHHH QELTMPKSPEKTSEKALDKNLSSKQEGSCKNFDTLHLQQHLKLFGTVDSLYSQSLDSEQQ HHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH ELLQSRREERSETYANQQSSEKKIETKVQIKDLCKDLFSQDQDSNQKQKKSPFQQDTSRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH NRIAKAAQAVPVIPPPSIGVFTLSYLLTKQGILSDFSSYGCHKDSVESTQRELDALHEKR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IETIKVSIEKEKRERLWGSLSDIIGWLAPFVSIGIGIVAILSGGGIFAFAGFFAGLISLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IKCLEKLKFWDWLEKHLPIKNEELRRKIITIIQWVVYLTPVILSICTLKVENLGFSPIIE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GAIKGIQPAIESTMAALRCAILFSQAEIYKLKGKLTKIQLDIELKSFDRDDHYERSQELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHH DNMESSFEALSRILNYMRELDQVYLHSLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSWLSQASEVLLNQDPYIPDAPRSQESSVPKISYSITVAPQEAQKSLPKFFTQKFQSQC CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH KSEPPITHHKTFIIATPRERILRFGSSFESQLHNTSQAQTSSPWNLFSQKNSTEASKALM CCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHCCHHHCCCCCHHHHHCCCCHHHHHHHH QELTMPKSPEKTSEKALDKNLSSKQEGSCKNFDTLHLQQHLKLFGTVDSLYSQSLDSEQQ HHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH ELLQSRREERSETYANQQSSEKKIETKVQIKDLCKDLFSQDQDSNQKQKKSPFQQDTSRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH NRIAKAAQAVPVIPPPSIGVFTLSYLLTKQGILSDFSSYGCHKDSVESTQRELDALHEKR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IETIKVSIEKEKRERLWGSLSDIIGWLAPFVSIGIGIVAILSGGGIFAFAGFFAGLISLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IKCLEKLKFWDWLEKHLPIKNEELRRKIITIIQWVVYLTPVILSICTLKVENLGFSPIIE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GAIKGIQPAIESTMAALRCAILFSQAEIYKLKGKLTKIQLDIELKSFDRDDHYERSQELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHH DNMESSFEALSRILNYMRELDQVYLHSLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA