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The map label for this gene is yajC

Identifier: 15618793

GI number: 15618793

Start: 1009006

End: 1009359

Strand: Reverse

Name: yajC

Synonym: CPn0884

Alternate gene names: 15618793

Gene position: 1009359-1009006 (Counterclockwise)

Preceding gene: 15618794

Following gene: 15618792

Centisome position: 82.05

GC content: 38.42

Gene sequence:

>354_bases
ATGCTTTCTCGTATAGTGACATGTTTTCTATTTTTACTGAGCTCTTTGCCCCTGTTTGCAGAAGAAGAAGCAGCTCAATC
AAAAAATACTTTTGTGCAACCTGCCGTGATGTTGGCAATTGCTATTCTATTTTTCTATTTTATCTTATGGCGTCCCGAAC
AAAAACGCAGAAAGGCCATGGAAAAGCGTAAGAATGATCTCGCTAAAGGAGATAAAGTCACTGCCATGGGAATCATCGGC
ACTGTTGACGATATCCGTGAGCACACGGTAATTTTAAATATTGCTTCTGGAAAAGTAGAAGTTTTAAAAGGAGCTATTTC
TGAAATCCTCAAGCCTAACGATAACAAATCATAA

Upstream 100 bases:

>100_bases
ATTTTACTAGAAAGAGAGATCGATCCCTAGGAAAAGCATTGAATGCTCGCTTCCTATTATGATAATCTTACTTCGAATTA
ACCCAAGTTAAGGTGATTGC

Downstream 100 bases:

>100_bases
GGAATTTCTTTTGAGACTTTCATCCCACGATTAAAATCGTGGGATTTCTTATTTATTGTCTTAAGGTTTATTGCTTTTTT
ATGCGCTAAGTTATAATTTG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLSRIVTCFLFLLSSLPLFAEEEAAQSKNTFVQPAVMLAIAILFFYFILWRPEQKRRKAMEKRKNDLAKGDKVTAMGIIG
TVDDIREHTVILNIASGKVEVLKGAISEILKPNDNKS

Sequences:

>Translated_117_residues
MLSRIVTCFLFLLSSLPLFAEEEAAQSKNTFVQPAVMLAIAILFFYFILWRPEQKRRKAMEKRKNDLAKGDKVTAMGIIG
TVDDIREHTVILNIASGKVEVLKGAISEILKPNDNKS
>Mature_117_residues
MLSRIVTCFLFLLSSLPLFAEEEAAQSKNTFVQPAVMLAIAILFFYFILWRPEQKRRKAMEKRKNDLAKGDKVTAMGIIG
TVDDIREHTVILNIASGKVEVLKGAISEILKPNDNKS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y884_CHLPN (Q9Z722)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   B86601
- PIR:   H72022
- RefSeq:   NP_225079.1
- RefSeq:   NP_300941.1
- RefSeq:   NP_445519.1
- RefSeq:   NP_877185.1
- GeneID:   1467592
- GeneID:   895683
- GeneID:   919648
- GeneID:   963450
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0982
- KEGG:   cpj:CPj0884
- KEGG:   cpn:CPn0884
- KEGG:   cpt:CpB0913
- TIGR:   CP_0982
- HOGENOM:   HBG730023
- OMA:   FAQPAVM
- ProtClustDB:   PRK05585
- BioCyc:   CPNE115711:CP_0982-MONOMER
- BioCyc:   CPNE115713:CPN0884-MONOMER
- BioCyc:   CPNE138677:CPJ0884-MONOMER
- BioCyc:   CPNE182082:CPB0913-MONOMER
- InterPro:   IPR003849
- PRINTS:   PR01853
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 13153; Mature: 13153

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc2290e0)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRIVTCFLFLLSSLPLFAEEEAAQSKNTFVQPAVMLAIAILFFYFILWRPEQKRRKAM
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EKRKNDLAKGDKVTAMGIIGTVDDIREHTVILNIASGKVEVLKGAISEILKPNDNKS
HHHHHHHCCCCCEEHHHHHHCHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MLSRIVTCFLFLLSSLPLFAEEEAAQSKNTFVQPAVMLAIAILFFYFILWRPEQKRRKAM
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EKRKNDLAKGDKVTAMGIIGTVDDIREHTVILNIASGKVEVLKGAISEILKPNDNKS
HHHHHHHCCCCCEEHHHHHHCHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362