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The map label for this gene is nqr6

Identifier: 15618792

GI number: 15618792

Start: 1007570

End: 1008865

Strand: Reverse

Name: nqr6

Synonym: CPn0883

Alternate gene names: 15618792

Gene position: 1008865-1007570 (Counterclockwise)

Preceding gene: 15618793

Following gene: 15618789

Centisome position: 82.01

GC content: 40.35

Gene sequence:

>1296_bases
ATGACTTGGCTTTCAGGCCTCTATTTCATTTGTATTGCTAGTCTTATCTTTTGCGCCATTGGCGTGATTCTTGCAGGTGT
GATCCTTCTATCTCGCAAGCTTTTCATTAAGGTACACCCTTGTAAATTAAAGATTAACGACAATGAAGAACTGACAAAAA
CTGTCGAAAGTGGTCAGACTCTCTTAGTTTCATTATTAAGTTCAGGAATTCCTATTCCCTCCCCTTGTGGAGGAAAAGCC
ACCTGTAAGCAATGTAAAGTTCGCGTTGTTAAAAATGCTGATGAGCCTTTAGAAACGGACCGTTCTACATTTTCAAAAAG
ACAACTCGAGGAAGGCTGGCGCCTTTCCTGCCAGTGCAAAGTTCAGCACGACATGAGTTTAGAAATTGAAGAGAGATATT
TAAATGCTTCTTCTTGGGAGGGCACTGTTATCTCTAATGACAATGTGGCTACCTTTATTAAAGAACTTGTTGTTGCTGTA
GACCCAAATAAACCTATTCCCTTTAAGCCTGGGGGCTACTTACAAATTACAGTACCGAGCTATAAAACGAACTCTTCCGA
TTGGAAGCAAACTATGGCTCCTGAGTATTACAGCGACTGGGAACACTTTCATCTATTTGATCAAGTTATAGACAACAGTC
AACTTCCTGCGGATTCTGCCAACAAAGCGTATTCTTTAGCTTCCTATCCTGCCGAGCTTCCTACAATTAAGTTTAATATA
CGTATTGCTACGCCTCCTTTCATTAATGGAAAGCCTAATTCAGAGATCCCTTGGGGAGTCTGTTCCTCCTATGTGTTCTC
TTTAAAACCTGGAGACAAAATTACAGTTTCTGGGCCTTATGGAGAATCTTTTATGAAAGATGACGACCGCCCTTTAATCT
TCCTAATTGGAGGAGCAGGTTCATCTTTTGGTAGGAGCCACATCCTAGATTTACTTTTAAACAAGCATTCCAAGAGAGAA
ATTGATCTTTGGTATGGGGCGCGCTCATTAAAAGAGAACATTTACCAAGAAGAATATGAAAATTTAGAACGACAGTTTCC
CAATTTCCATTATCACCTAGTCCTTTCTGAGCCTCTTCCTGAAGATATTGCTGCAGGTTGGGATAAAGATGACCCTACAA
AGACAAACTTCCTATTTCGGGCATTTAATCTAGGTCAATTGAGTAGGTTAGATAATCCTGAAGACTATCTTTACTACGTA
TGTGGTCCACCGCTACACAATAGCAGTATTCTTAAACTTCTTGGTGACTATGGGGTCGAGCGCAGTTCGATTATTCTTGA
TGATTTTGGAAGCTAG

Upstream 100 bases:

>100_bases
GGGATTTCTTATTTATTGTCTTAAGGTTTATTGCTTTTTTATGCGCTAAGTTATAATTTGACTCTATGAGCTTTTCATAA
AGTCTGGGATTTTTATCGTT

Downstream 100 bases:

>100_bases
TGGATCTGGTTTTTCTTTATTGACGACGACGTCTTCTTAGAAGAGAAAGTAGAGACATCGTATATAAGATAATAGAGAAG
AAGCAAAAGATCATATGCAC

Product: Na(+)-translocating NADH-quinone reductase subunit F

Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]

Alternate protein names: Na(+)-NQR subunit F; Na(+)-translocating NQR subunit F; NQR complex subunit F; NQR-1 subunit F

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTWLSGLYFICIASLIFCAIGVILAGVILLSRKLFIKVHPCKLKINDNEELTKTVESGQTLLVSLLSSGIPIPSPCGGKA
TCKQCKVRVVKNADEPLETDRSTFSKRQLEEGWRLSCQCKVQHDMSLEIEERYLNASSWEGTVISNDNVATFIKELVVAV
DPNKPIPFKPGGYLQITVPSYKTNSSDWKQTMAPEYYSDWEHFHLFDQVIDNSQLPADSANKAYSLASYPAELPTIKFNI
RIATPPFINGKPNSEIPWGVCSSYVFSLKPGDKITVSGPYGESFMKDDDRPLIFLIGGAGSSFGRSHILDLLLNKHSKRE
IDLWYGARSLKENIYQEEYENLERQFPNFHYHLVLSEPLPEDIAAGWDKDDPTKTNFLFRAFNLGQLSRLDNPEDYLYYV
CGPPLHNSSILKLLGDYGVERSSIILDDFGS

Sequences:

>Translated_431_residues
MTWLSGLYFICIASLIFCAIGVILAGVILLSRKLFIKVHPCKLKINDNEELTKTVESGQTLLVSLLSSGIPIPSPCGGKA
TCKQCKVRVVKNADEPLETDRSTFSKRQLEEGWRLSCQCKVQHDMSLEIEERYLNASSWEGTVISNDNVATFIKELVVAV
DPNKPIPFKPGGYLQITVPSYKTNSSDWKQTMAPEYYSDWEHFHLFDQVIDNSQLPADSANKAYSLASYPAELPTIKFNI
RIATPPFINGKPNSEIPWGVCSSYVFSLKPGDKITVSGPYGESFMKDDDRPLIFLIGGAGSSFGRSHILDLLLNKHSKRE
IDLWYGARSLKENIYQEEYENLERQFPNFHYHLVLSEPLPEDIAAGWDKDDPTKTNFLFRAFNLGQLSRLDNPEDYLYYV
CGPPLHNSSILKLLGDYGVERSSIILDDFGS
>Mature_430_residues
TWLSGLYFICIASLIFCAIGVILAGVILLSRKLFIKVHPCKLKINDNEELTKTVESGQTLLVSLLSSGIPIPSPCGGKAT
CKQCKVRVVKNADEPLETDRSTFSKRQLEEGWRLSCQCKVQHDMSLEIEERYLNASSWEGTVISNDNVATFIKELVVAVD
PNKPIPFKPGGYLQITVPSYKTNSSDWKQTMAPEYYSDWEHFHLFDQVIDNSQLPADSANKAYSLASYPAELPTIKFNIR
IATPPFINGKPNSEIPWGVCSSYVFSLKPGDKITVSGPYGESFMKDDDRPLIFLIGGAGSSFGRSHILDLLLNKHSKREI
DLWYGARSLKENIYQEEYENLERQFPNFHYHLVLSEPLPEDIAAGWDKDDPTKTNFLFRAFNLGQLSRLDNPEDYLYYVC
GPPLHNSSILKLLGDYGVERSSIILDDFGS

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by nqrF, which accepts electrons from NADH and reduces

COG id: COG2871

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NQRF_CHLPN (Q9Z723)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A86601
- PIR:   G72022
- RefSeq:   NP_225078.1
- RefSeq:   NP_300940.1
- RefSeq:   NP_445520.1
- RefSeq:   NP_877184.1
- ProteinModelPortal:   Q9Z723
- GeneID:   1467591
- GeneID:   895388
- GeneID:   919647
- GeneID:   963451
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0983
- KEGG:   cpn:CPn0883
- KEGG:   cpt:CpB0912
- TIGR:   CP_0983
- HOGENOM:   HBG680293
- OMA:   HKAPEDC
- ProtClustDB:   PRK05464
- BioCyc:   CPNE115711:CP_0983-MONOMER
- BioCyc:   CPNE115713:CPN0883-MONOMER
- BioCyc:   CPNE138677:CPJ0883-MONOMER
- BioCyc:   CPNE182082:CPB0912-MONOMER
- HAMAP:   MF_00430
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR010205
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938
- Gene3D:   G3DSA:3.10.20.30
- TIGRFAMs:   TIGR01941

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1; SSF54292 Ferredoxin; SSF63380 Riboflavin_synthase_like_b-brl

EC number: 1.5.1.29 [C]

Molecular weight: Translated: 48501; Mature: 48369

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00197 2FE2S_FER_1; PS51085 2FE2S_FER_2; PS51384 FAD_FR

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd52d5fc)-;

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWLSGLYFICIASLIFCAIGVILAGVILLSRKLFIKVHPCKLKINDNEELTKTVESGQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEEECCCHHHHHHHHCCHH
LLVSLLSSGIPIPSPCGGKATCKQCKVRVVKNADEPLETDRSTFSKRQLEEGWRLSCQCK
HHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
VQHDMSLEIEERYLNASSWEGTVISNDNVATFIKELVVAVDPNKPIPFKPGGYLQITVPS
ECCCCCEEEHHHHCCCCCCCCEEEECCCHHHHHHHHHEEECCCCCCCCCCCCEEEEEECC
YKTNSSDWKQTMAPEYYSDWEHFHLFDQVIDNSQLPADSANKAYSLASYPAELPTIKFNI
CCCCCHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCCCCCCEEEEEE
RIATPPFINGKPNSEIPWGVCSSYVFSLKPGDKITVSGPYGESFMKDDDRPLIFLIGGAG
EECCCCCCCCCCCCCCCHHHHCCEEEEECCCCEEEEECCCCCHHCCCCCCCEEEEEECCC
SSFGRSHILDLLLNKHSKREIDLWYGARSLKENIYQEEYENLERQFPNFHYHLVLSEPLP
CCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
EDIAAGWDKDDPTKTNFLFRAFNLGQLSRLDNPEDYLYYVCGPPLHNSSILKLLGDYGVE
HHHHCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC
RSSIILDDFGS
CCEEEECCCCH
>Mature Secondary Structure 
TWLSGLYFICIASLIFCAIGVILAGVILLSRKLFIKVHPCKLKINDNEELTKTVESGQT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEEECCCHHHHHHHHCCHH
LLVSLLSSGIPIPSPCGGKATCKQCKVRVVKNADEPLETDRSTFSKRQLEEGWRLSCQCK
HHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
VQHDMSLEIEERYLNASSWEGTVISNDNVATFIKELVVAVDPNKPIPFKPGGYLQITVPS
ECCCCCEEEHHHHCCCCCCCCEEEECCCHHHHHHHHHEEECCCCCCCCCCCCEEEEEECC
YKTNSSDWKQTMAPEYYSDWEHFHLFDQVIDNSQLPADSANKAYSLASYPAELPTIKFNI
CCCCCHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCCCCCCEEEEEE
RIATPPFINGKPNSEIPWGVCSSYVFSLKPGDKITVSGPYGESFMKDDDRPLIFLIGGAG
EECCCCCCCCCCCCCCCHHHHCCEEEEECCCCEEEEECCCCCHHCCCCCCCEEEEEECCC
SSFGRSHILDLLLNKHSKREIDLWYGARSLKENIYQEEYENLERQFPNFHYHLVLSEPLP
CCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
EDIAAGWDKDDPTKTNFLFRAFNLGQLSRLDNPEDYLYYVCGPPLHNSSILKLLGDYGVE
HHHHCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC
RSSIILDDFGS
CCEEEECCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NAD(P)H2; FMN [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]

Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362