| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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The map label for this gene is tctD
Identifier: 15618659
GI number: 15618659
Start: 845704
End: 846411
Strand: Reverse
Name: tctD
Synonym: CPn0750
Alternate gene names: 15618659
Gene position: 846411-845704 (Counterclockwise)
Preceding gene: 15618662
Following gene: 15618658
Centisome position: 68.8
GC content: 38.56
Gene sequence:
>708_bases ATGATCGGTGATAAAATCATATTGTTTGTTACTGAGGATCTCAGTTTATCTTCGCAATTAAAAGACTTGGCATCACAAAG ATCTGATTACCAAATACTCGTATCTCCGGTGTTTCCGACATCTTTTGAATCTGTTGCTATATTTTGTGAATACCTATTGC TACCTGAGCAAATTTTCTCTCCTGGGATCTTTCCAGAAGAAGATTTAATTGTTCTATTCGATACATTTCAAGAAGAGGCG ATCACAAAGGTGTTAAATCAAGGAGCAACAGGGTATCTTCTCCGTCCTATTACAGCGAAAGTATTAGATGCCGTGATCAG AGCTTTCCTACGCCAACACGAAGTTCTAGAGCATAGCATTCCAGATACAATGACTTTTGGAGATCATACATTCCGAGTCT TGAATCTCGTGATAGAATCTCCAGAAGGAAGCGTATACCTTACCCCTTCTGAAGCAGGTATTCTTAAAAAACTCCTTATC AACCGTGGACACCTATGTCTCCGAAAGAATCTTTTAGCAGAGATTAAAGGAAATACTAAAGAAATCATTGCTCGCAACGT GGATGTCCATATTGCTTCTTTAAGAAAAAAATTAGGTCCCTACGGATCTAAAATTGTAACGATTCGTGGTGTAGGCTATC TATTTTCAGATGATGACAGTATTCCTCTCCAGAATCATGACAATACAGCGCATCCAAACGAAGAGTAA
Upstream 100 bases:
>100_bases TATTTTTCAAAAAAGAAAAAAGTAAAAAAGTGTAAGTGACCTTTGAAAAATAACTGATTTTATATTACGTATTCATTCAT ATAATCTATTTTGTTTTCAT
Downstream 100 bases:
>100_bases AGTAAGTTCTTTATATCTTGTAAGTAAATCTTCAGAGTATGAAAATACTGAGGCAAATAGCTTGAGTATGCTATATGACT TATCTAGCCTCGTCTATATT
Product: HTH transcriptional regulatory protein + receiver Doman
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulatory Protein; Pho Two-Component System Sensor Histidine Kinase; Two-Component Response Regulator PhoB; HTH Transcriptional Regulatory Protein And Receiver Domain; Winged Helix Family Two Component Transcriptional Regulator; Response Regulator; Two-Component System Regulator LlrA; Phosphate Regulon Transcriptional Regulatory Protein PhoB; Response Regulator Receiver; Trans-Activating Transcription Regulator; Two-Component Response Regulator PhoP
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCEYLLLPEQIFSPGIFPEEDLIVLFDTFQEEA ITKVLNQGATGYLLRPITAKVLDAVIRAFLRQHEVLEHSIPDTMTFGDHTFRVLNLVIESPEGSVYLTPSEAGILKKLLI NRGHLCLRKNLLAEIKGNTKEIIARNVDVHIASLRKKLGPYGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE
Sequences:
>Translated_235_residues MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCEYLLLPEQIFSPGIFPEEDLIVLFDTFQEEA ITKVLNQGATGYLLRPITAKVLDAVIRAFLRQHEVLEHSIPDTMTFGDHTFRVLNLVIESPEGSVYLTPSEAGILKKLLI NRGHLCLRKNLLAEIKGNTKEIIARNVDVHIASLRKKLGPYGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE >Mature_235_residues MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCEYLLLPEQIFSPGIFPEEDLIVLFDTFQEEA ITKVLNQGATGYLLRPITAKVLDAVIRAFLRQHEVLEHSIPDTMTFGDHTFRVLNLVIESPEGSVYLTPSEAGILKKLLI NRGHLCLRKNLLAEIKGNTKEIIARNVDVHIASLRKKLGPYGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26289; Mature: 26289
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCEYLLLPEQIFS CCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHCC PGIFPEEDLIVLFDTFQEEAITKVLNQGATGYLLRPITAKVLDAVIRAFLRQHEVLEHSI CCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC PDTMTFGDHTFRVLNLVIESPEGSVYLTPSEAGILKKLLINRGHLCLRKNLLAEIKGNTK CCCCCCCCHHHHHHHHHEECCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH EIIARNVDVHIASLRKKLGPYGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE HHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCEYLLLPEQIFS CCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHCC PGIFPEEDLIVLFDTFQEEAITKVLNQGATGYLLRPITAKVLDAVIRAFLRQHEVLEHSI CCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC PDTMTFGDHTFRVLNLVIESPEGSVYLTPSEAGILKKLLINRGHLCLRKNLLAEIKGNTK CCCCCCCCHHHHHHHHHEECCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH EIIARNVDVHIASLRKKLGPYGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE HHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA