| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15607061
Identifier: 15607061
GI number: 15607061
Start: 1483320
End: 1485179
Strand: Direct
Name: 15607061
Synonym: aq_2107
Alternate gene names: NA
Gene position: 1483320-1485179 (Clockwise)
Preceding gene: 15607060
Following gene: 15607062
Centisome position: 95.62
GC content: 41.29
Gene sequence:
>1860_bases ATGATAGTAGACGTCAAGGAGTTCTTACAGACACACTACCCCTTTTCCTCCCTCCCCCCTTCTTCTTTAGAAAATCTTTC TAAAGTCATAAAGGTTAAGTACTACCCTAAGGGAAGCGAGATATTCAAAAAGGACGAAAAACCACTTGAATACCTTTACG TAATAAGGAAGGGAAACGTATCCCTCAGGTCCGACGGTGTTGAGATAGACTTTCTATCCGAAGGAGACAGCTTCGGTTTT ATATCTCTAATCACCGATTCCCCTCCATCCTCAACAGCGGTAGCGGAAACGGATGTAATCCTTTACTTAATTCCTAAGGA AGTCTTTAAACAATTAATGGAGAAGTACCCCGAGTTCAGGAATTACTTTACGACTTCCCTCGCAAAGAGAATCGCCCACA CAGCCGAAAGAGTAAAGGAAAACGGCGGAGCAAAAACCTTTGAGAAATTCTTAACGGTTCAGGTAAAGGATTTAAAGTTA AGAAAAGTCCCATTTATACTTCCCTCAGAGAGTGTTTACGAAGCGGTAAAGAAAATGGTAGAAGACAATTCAAGTTGTGC TATTGTAAAGTCAGAGGACGAAGAAGGTATTATAACGGAGAGGGACGTTCTTAAAAAGGTAATCTACAGGGATTTGAACC CTAAAGAGGTAAAAGTCAAAGAAGTAATGACAAGCCCCCTGATAAGCGTAGAGCCCACAGATTTCCTCTTCGACGTCCTG CTTACCATGTCCAAGAACAACATAAGGAGAGTGGTTGTAAAGGAAGACGGAAACATACTCGGAGTTTTAGAAGACAAGGA CATAATAGCCCTTGAAACCCAAAACCTTATAGTGATAGTAAAGGAAGTTGAAAAGGCAAAGAGCGTAGAAGAACTCTCTT ACCTTTACTCCTTAGTTGACGATATGGCGGTAAACCTCTTCAACGAAGGTGTGAAACCCGAAGTAATAAGCAGACTAATA TCCGAAATTAACGACAAGTTCATATCAAAAGCCATACAGCTCGCTATAAAGGAACTGGGACTTGAACCTATCGTTTCTTT CAGTTTCATGGTTCTGGGAAGCGAAGGGAGGAAGGAACAAACCCTCAAGACTGATCAAGACAACGCCTTAATATACGACG ACACTTACCCTTCACTGGACGTTGACCTTGAAGATTACTTTAAGAAATTCGGTGAGAAGATTTCGGAAATCCTTTTGAAA ATTGGATTTCCCCCCTGTCCTTCAAACGTAATGGTAAGGAATCCGGAGTGGAACAAAGGAAAAACAGAGTGGCTGAAAAC CCTAGAAAAGTGGTTCTCAAAACCCGATCCCGAAAACACCTTAAAACTGGGAATCTTCCTAGACTTCAGGAACGTATTCG GAGATAAAACCCTAGAAGAAGAACTGAGGAAAAAGGTCTTCGAACTCGCAAAGGAAAACGAACTCTTAATAGCTTACATG TTTAAGGATACGGTCAGGTTCAAACCCCCCTTAGGACTTTTCGGAAGACTTAAAGTAGAAAAGGAAGGTATTGATATAAA GAAGGGCGGGATATTCCCTATAACGAGCGGTATAAGAACCTTGGCTATAAAAAACGAAATTGCGGAAACGAACACCCTTG ATAGGATGAAAAAACTCTACGAGAAAGGAGTCCTCTACAAGGAGCTTTACGAAAACCTGAAGGAAGCCTTCAATTACCTT CAGTACATAAGGTTAAAGTCCCAGATAGAAAAACTAAAGGAAGGGAAACAGCCTGATAACTACGTCAATCCAGAAAGACT CAGTAAGCTAGAACTGGATCTTTTGAAGGACGCCTTTAAGGTAGTAGCTCAGTTTCAGGAATTTATAGAGACGAAGTACC TGACCTACATACCCTCATGA
Upstream 100 bases:
>100_bases TGATAGTCTCCTACATAGTCACGATGATGACACCACCTCCCTCCGAAAGGGTACAGAAACTCGTTGAGGACATCAGGTAT CCCAAGAAGATTCACGAAGT
Downstream 100 bases:
>100_bases ACTTCCTGAAAAAGTTCCTTTTACTGAGAAAAGCTCAAAAGTCTCCTTACTTCGAAGAGTTCTACGAAGAAATCGATTTG AACCAGAAGGTGAAAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MIVDVKEFLQTHYPFSSLPPSSLENLSKVIKVKYYPKGSEIFKKDEKPLEYLYVIRKGNVSLRSDGVEIDFLSEGDSFGF ISLITDSPPSSTAVAETDVILYLIPKEVFKQLMEKYPEFRNYFTTSLAKRIAHTAERVKENGGAKTFEKFLTVQVKDLKL RKVPFILPSESVYEAVKKMVEDNSSCAIVKSEDEEGIITERDVLKKVIYRDLNPKEVKVKEVMTSPLISVEPTDFLFDVL LTMSKNNIRRVVVKEDGNILGVLEDKDIIALETQNLIVIVKEVEKAKSVEELSYLYSLVDDMAVNLFNEGVKPEVISRLI SEINDKFISKAIQLAIKELGLEPIVSFSFMVLGSEGRKEQTLKTDQDNALIYDDTYPSLDVDLEDYFKKFGEKISEILLK IGFPPCPSNVMVRNPEWNKGKTEWLKTLEKWFSKPDPENTLKLGIFLDFRNVFGDKTLEEELRKKVFELAKENELLIAYM FKDTVRFKPPLGLFGRLKVEKEGIDIKKGGIFPITSGIRTLAIKNEIAETNTLDRMKKLYEKGVLYKELYENLKEAFNYL QYIRLKSQIEKLKEGKQPDNYVNPERLSKLELDLLKDAFKVVAQFQEFIETKYLTYIPS
Sequences:
>Translated_619_residues MIVDVKEFLQTHYPFSSLPPSSLENLSKVIKVKYYPKGSEIFKKDEKPLEYLYVIRKGNVSLRSDGVEIDFLSEGDSFGF ISLITDSPPSSTAVAETDVILYLIPKEVFKQLMEKYPEFRNYFTTSLAKRIAHTAERVKENGGAKTFEKFLTVQVKDLKL RKVPFILPSESVYEAVKKMVEDNSSCAIVKSEDEEGIITERDVLKKVIYRDLNPKEVKVKEVMTSPLISVEPTDFLFDVL LTMSKNNIRRVVVKEDGNILGVLEDKDIIALETQNLIVIVKEVEKAKSVEELSYLYSLVDDMAVNLFNEGVKPEVISRLI SEINDKFISKAIQLAIKELGLEPIVSFSFMVLGSEGRKEQTLKTDQDNALIYDDTYPSLDVDLEDYFKKFGEKISEILLK IGFPPCPSNVMVRNPEWNKGKTEWLKTLEKWFSKPDPENTLKLGIFLDFRNVFGDKTLEEELRKKVFELAKENELLIAYM FKDTVRFKPPLGLFGRLKVEKEGIDIKKGGIFPITSGIRTLAIKNEIAETNTLDRMKKLYEKGVLYKELYENLKEAFNYL QYIRLKSQIEKLKEGKQPDNYVNPERLSKLELDLLKDAFKVVAQFQEFIETKYLTYIPS >Mature_619_residues MIVDVKEFLQTHYPFSSLPPSSLENLSKVIKVKYYPKGSEIFKKDEKPLEYLYVIRKGNVSLRSDGVEIDFLSEGDSFGF ISLITDSPPSSTAVAETDVILYLIPKEVFKQLMEKYPEFRNYFTTSLAKRIAHTAERVKENGGAKTFEKFLTVQVKDLKL RKVPFILPSESVYEAVKKMVEDNSSCAIVKSEDEEGIITERDVLKKVIYRDLNPKEVKVKEVMTSPLISVEPTDFLFDVL LTMSKNNIRRVVVKEDGNILGVLEDKDIIALETQNLIVIVKEVEKAKSVEELSYLYSLVDDMAVNLFNEGVKPEVISRLI SEINDKFISKAIQLAIKELGLEPIVSFSFMVLGSEGRKEQTLKTDQDNALIYDDTYPSLDVDLEDYFKKFGEKISEILLK IGFPPCPSNVMVRNPEWNKGKTEWLKTLEKWFSKPDPENTLKLGIFLDFRNVFGDKTLEEELRKKVFELAKENELLIAYM FKDTVRFKPPLGLFGRLKVEKEGIDIKKGGIFPITSGIRTLAIKNEIAETNTLDRMKKLYEKGVLYKELYENLKEAFNYL QYIRLKSQIEKLKEGKQPDNYVNPERLSKLELDLLKDAFKVVAQFQEFIETKYLTYIPS
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71213; Mature: 71213
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDVKEFLQTHYPFSSLPPSSLENLSKVIKVKYYPKGSEIFKKDEKPLEYLYVIRKGNV CCCCHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCCHHHHHCCCCCEEEEEEEECCCE SLRSDGVEIDFLSEGDSFGFISLITDSPPSSTAVAETDVILYLIPKEVFKQLMEKYPEFR EEECCCEEEEEECCCCCCEEEEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHCHHHH NYFTTSLAKRIAHTAERVKENGGAKTFEKFLTVQVKDLKLRKVPFILPSESVYEAVKKMV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCEEEECCEECCCHHHHHHHHHHH EDNSSCAIVKSEDEEGIITERDVLKKVIYRDLNPKEVKVKEVMTSPLISVEPTDFLFDVL CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH LTMSKNNIRRVVVKEDGNILGVLEDKDIIALETQNLIVIVKEVEKAKSVEELSYLYSLVD HHHCCCCEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHH DMAVNLFNEGVKPEVISRLISEINDKFISKAIQLAIKELGLEPIVSFSFMVLGSEGRKEQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCC TLKTDQDNALIYDDTYPSLDVDLEDYFKKFGEKISEILLKIGFPPCPSNVMVRNPEWNKG CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC KTEWLKTLEKWFSKPDPENTLKLGIFLDFRNVFGDKTLEEELRKKVFELAKENELLIAYM HHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE FKDTVRFKPPLGLFGRLKVEKEGIDIKKGGIFPITSGIRTLAIKNEIAETNTLDRMKKLY ECCCCCCCCCCCCCEEEEEECCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH EKGVLYKELYENLKEAFNYLQYIRLKSQIEKLKEGKQPDNYVNPERLSKLELDLLKDAFK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH VVAQFQEFIETKYLTYIPS HHHHHHHHHHHHHHEECCC >Mature Secondary Structure MIVDVKEFLQTHYPFSSLPPSSLENLSKVIKVKYYPKGSEIFKKDEKPLEYLYVIRKGNV CCCCHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCCHHHHHCCCCCEEEEEEEECCCE SLRSDGVEIDFLSEGDSFGFISLITDSPPSSTAVAETDVILYLIPKEVFKQLMEKYPEFR EEECCCEEEEEECCCCCCEEEEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHCHHHH NYFTTSLAKRIAHTAERVKENGGAKTFEKFLTVQVKDLKLRKVPFILPSESVYEAVKKMV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCEEEECCEECCCHHHHHHHHHHH EDNSSCAIVKSEDEEGIITERDVLKKVIYRDLNPKEVKVKEVMTSPLISVEPTDFLFDVL CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH LTMSKNNIRRVVVKEDGNILGVLEDKDIIALETQNLIVIVKEVEKAKSVEELSYLYSLVD HHHCCCCEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHH DMAVNLFNEGVKPEVISRLISEINDKFISKAIQLAIKELGLEPIVSFSFMVLGSEGRKEQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCC TLKTDQDNALIYDDTYPSLDVDLEDYFKKFGEKISEILLKIGFPPCPSNVMVRNPEWNKG CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC KTEWLKTLEKWFSKPDPENTLKLGIFLDFRNVFGDKTLEEELRKKVFELAKENELLIAYM HHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE FKDTVRFKPPLGLFGRLKVEKEGIDIKKGGIFPITSGIRTLAIKNEIAETNTLDRMKKLY ECCCCCCCCCCCCCEEEEEECCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH EKGVLYKELYENLKEAFNYLQYIRLKSQIEKLKEGKQPDNYVNPERLSKLELDLLKDAFK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH VVAQFQEFIETKYLTYIPS HHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA