| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
Click here to switch to the map view.
The map label for this gene is 15606977
Identifier: 15606977
GI number: 15606977
Start: 1394503
End: 1395147
Strand: Direct
Name: 15606977
Synonym: aq_1982
Alternate gene names: NA
Gene position: 1394503-1395147 (Clockwise)
Preceding gene: 15606975
Following gene: 15606978
Centisome position: 89.89
GC content: 43.88
Gene sequence:
>645_bases ATGGTAAAAGTATCCGCAGAAAACTTCCTTTACTTTGCCATTTCAGTTCTCGTAAACCTGCTCTTTCTGAAAATTCTCTA CATCTACTTATTCCTTCCGAATATAAGCCCGCCTCAAGCTTTTACGCCCCTGAGTGTGAAGATAGAGGAAATAAAGGCTC CGCCAAAGAAGCCGGGAAAGCCGCAGAAAAAAGTGGTGAAAAAGAAGCCCGAGGCTGTATCAGTCTCTCAGGCTCCCGAA AAGGGGGATGTGCCCGTAGAAGTGAAGGAAGAAAAGGAAGTTTCACTCCTTCCCGAACTTGAAAAGAAGATCAAGGAAAG ACTGAAGAAGAGAAAAGAGGTAAAACAAATAGGAGAGATTTCCGCGGTAGTTTCGAAGCAGAAAGTGGAAATAAGACTGG GAAGCAGGAAGCTCGTTCACGTACCTCCGCCCCCCGTTTTTCACGTAAAGGAATACCCATCTCTCGTTCGCATAAAGATA TGGGTAAATCCGGAAGGGAGAGTGATAAGGGCTATTATTATCCAGAGGAGCGGTGTAACGGAAGTTGACGAAGGACTTTT GAGATTTACGAAAAAACTGAAGTTTGAACCTATTGAAGTTCCCGAAGTTCAGGAAGGTGTGATAACCTTTACTTTTTCCA CTTAA
Upstream 100 bases:
>100_bases TATCTTCCTCCCGTATCCGCCCCCTACGGAAGCGATTTCCTTTAGAATTTCATCATCCAGACTTTCCTTTGAGAGCATCA AGTTTTAATATAAAGACTTA
Downstream 100 bases:
>100_bases AATTTATGGTATGGAAAACTTAAAAAAGTACCTAGAAGTTGCAAAAATAGCCGCGCTCGCGGGTGGGCAGGTTCTGAAAG AAAACTTCGGAAAGGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MVKVSAENFLYFAISVLVNLLFLKILYIYLFLPNISPPQAFTPLSVKIEEIKAPPKKPGKPQKKVVKKKPEAVSVSQAPE KGDVPVEVKEEKEVSLLPELEKKIKERLKKRKEVKQIGEISAVVSKQKVEIRLGSRKLVHVPPPPVFHVKEYPSLVRIKI WVNPEGRVIRAIIIQRSGVTEVDEGLLRFTKKLKFEPIEVPEVQEGVITFTFST
Sequences:
>Translated_214_residues MVKVSAENFLYFAISVLVNLLFLKILYIYLFLPNISPPQAFTPLSVKIEEIKAPPKKPGKPQKKVVKKKPEAVSVSQAPE KGDVPVEVKEEKEVSLLPELEKKIKERLKKRKEVKQIGEISAVVSKQKVEIRLGSRKLVHVPPPPVFHVKEYPSLVRIKI WVNPEGRVIRAIIIQRSGVTEVDEGLLRFTKKLKFEPIEVPEVQEGVITFTFST >Mature_214_residues MVKVSAENFLYFAISVLVNLLFLKILYIYLFLPNISPPQAFTPLSVKIEEIKAPPKKPGKPQKKVVKKKPEAVSVSQAPE KGDVPVEVKEEKEVSLLPELEKKIKERLKKRKEVKQIGEISAVVSKQKVEIRLGSRKLVHVPPPPVFHVKEYPSLVRIKI WVNPEGRVIRAIIIQRSGVTEVDEGLLRFTKKLKFEPIEVPEVQEGVITFTFST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1982_AQUAE (O67790)
Other databases:
- EMBL: AE000657 - PIR: B70470 - RefSeq: NP_214359.1 - GeneID: 1193687 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1982 - NMPDR: fig|224324.1.peg.1374 - OMA: KITTSET - ProtClustDB: CLSK2299890 - BioCyc: AAEO224324:AQ_1982-MONOMER - InterPro: IPR006260 - TIGRFAMs: TIGR01352
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24306; Mature: 24306
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xea4022c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVSAENFLYFAISVLVNLLFLKILYIYLFLPNISPPQAFTPLSVKIEEIKAPPKKPGK CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCC PQKKVVKKKPEAVSVSQAPEKGDVPVEVKEEKEVSLLPELEKKIKERLKKRKEVKQIGEI CHHHHHHCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAVVSKQKVEIRLGSRKLVHVPPPPVFHVKEYPSLVRIKIWVNPEGRVIRAIIIQRSGVT HHHHHHHEEEEEECCEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCC EVDEGLLRFTKKLKFEPIEVPEVQEGVITFTFST HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECH >Mature Secondary Structure MVKVSAENFLYFAISVLVNLLFLKILYIYLFLPNISPPQAFTPLSVKIEEIKAPPKKPGK CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCC PQKKVVKKKPEAVSVSQAPEKGDVPVEVKEEKEVSLLPELEKKIKERLKKRKEVKQIGEI CHHHHHHCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAVVSKQKVEIRLGSRKLVHVPPPPVFHVKEYPSLVRIKIWVNPEGRVIRAIIIQRSGVT HHHHHHHEEEEEECCEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCC EVDEGLLRFTKKLKFEPIEVPEVQEGVITFTFST HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320