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The map label for this gene is ygdH [C]

Identifier: 15606913

GI number: 15606913

Start: 1327171

End: 1327923

Strand: Direct

Name: ygdH [C]

Synonym: aq_1884

Alternate gene names: 15606913

Gene position: 1327171-1327923 (Clockwise)

Preceding gene: 15606912

Following gene: 15606914

Centisome position: 85.55

GC content: 44.89

Gene sequence:

>753_bases
ATGGACAAAGACAGCTTAAGGATCATTGAAGAGTTAAAGATAAGACAGGGTGATACTTGGCGTGTATTCAAGATAATGAG
CGAGTTCGTGCAGGGCTTTGACGAGCTCAGTGACGTCGGCCCTGCGGTAACCTTTTTCGGAAGTTCAAGGGCAAAGGAGA
CGGACAAGTACTACAAACTCGCTTACGAGACGGCTTTCAACCTCGGGAAACTCGGTTTTACGATAATAACGGGGGGAGGA
CCCGGGATAATGGAGGCGGCAAACAGGGGAGCGTACGACAGCGGAACGGAAAGCATCGGACTGAACATAGACATCCCCAG
AGAACAGTTTCCCAATAAGTACCAGACTAAAAACCTGAAGTTCAAATACTTCTTCGTAAGAAAAGTGATGCTCCTCAAGT
ACGCCATGGCTTACGTGATCTTTCCGGGAGGTTTCGGTACCTTTGATGAGCTCTTTGAAGCGCTTACACTTATACAAACT
GGAAAGAGTCATAAATTCCCGTTAATACTTTTCGGCAGTGAGTACTACTCCCACCTGTTGAAGTTCATGGAAGAGGTAAT
GGTAAAGTTCGGAACGATAGACAAGGAAGACATTAACTTGATGGTTCTCGTGGACGACCCCAGAGACGTTGTAAAGCACA
TAATGAACAAAGCGAGGGAAAAGTACTTCCACTTGAAAAAGTTCGGAGAGACTTCCTTTCTGAGAAAACTTGAGAGAATA
TTAAAGAATTATGAGGCTTATACATCTGTCTGA

Upstream 100 bases:

>100_bases
AGAGAAGGGTGTGGATAAGGCGATATCCGAGAAAGGCCAACACTCTAACTGACGCACACAGGGTAAAGCTCGAAGAAATG
GTAAAAGAGATGTTCTAAAA

Downstream 100 bases:

>100_bases
CATCCACGCGGGAAAGAATCTCGGGCGTGTCTCGAGAAACGAAGACGTAGTTTACGCACTCAATCAGGTAGTAGACTTTT
GCAAAGAAAACAAACCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDKDSLRIIEELKIRQGDTWRVFKIMSEFVQGFDELSDVGPAVTFFGSSRAKETDKYYKLAYETAFNLGKLGFTIITGGG
PGIMEAANRGAYDSGTESIGLNIDIPREQFPNKYQTKNLKFKYFFVRKVMLLKYAMAYVIFPGGFGTFDELFEALTLIQT
GKSHKFPLILFGSEYYSHLLKFMEEVMVKFGTIDKEDINLMVLVDDPRDVVKHIMNKAREKYFHLKKFGETSFLRKLERI
LKNYEAYTSV

Sequences:

>Translated_250_residues
MDKDSLRIIEELKIRQGDTWRVFKIMSEFVQGFDELSDVGPAVTFFGSSRAKETDKYYKLAYETAFNLGKLGFTIITGGG
PGIMEAANRGAYDSGTESIGLNIDIPREQFPNKYQTKNLKFKYFFVRKVMLLKYAMAYVIFPGGFGTFDELFEALTLIQT
GKSHKFPLILFGSEYYSHLLKFMEEVMVKFGTIDKEDINLMVLVDDPRDVVKHIMNKAREKYFHLKKFGETSFLRKLERI
LKNYEAYTSV
>Mature_250_residues
MDKDSLRIIEELKIRQGDTWRVFKIMSEFVQGFDELSDVGPAVTFFGSSRAKETDKYYKLAYETAFNLGKLGFTIITGGG
PGIMEAANRGAYDSGTESIGLNIDIPREQFPNKYQTKNLKFKYFFVRKVMLLKYAMAYVIFPGGFGTFDELFEALTLIQT
GKSHKFPLILFGSEYYSHLLKFMEEVMVKFGTIDKEDINLMVLVDDPRDVVKHIMNKAREKYFHLKKFGETSFLRKLERI
LKNYEAYTSV

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28882; Mature: 28882

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDSLRIIEELKIRQGDTWRVFKIMSEFVQGFDELSDVGPAVTFFGSSRAKETDKYYKL
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
AYETAFNLGKLGFTIITGGGPGIMEAANRGAYDSGTESIGLNIDIPREQFPNKYQTKNLK
HHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCE
FKYFFVRKVMLLKYAMAYVIFPGGFGTFDELFEALTLIQTGKSHKFPLILFGSEYYSHLL
EHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
KFMEEVMVKFGTIDKEDINLMVLVDDPRDVVKHIMNKAREKYFHLKKFGETSFLRKLERI
HHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LKNYEAYTSV
HHHHHHHHCC
>Mature Secondary Structure
MDKDSLRIIEELKIRQGDTWRVFKIMSEFVQGFDELSDVGPAVTFFGSSRAKETDKYYKL
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
AYETAFNLGKLGFTIITGGGPGIMEAANRGAYDSGTESIGLNIDIPREQFPNKYQTKNLK
HHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCE
FKYFFVRKVMLLKYAMAYVIFPGGFGTFDELFEALTLIQTGKSHKFPLILFGSEYYSHLL
EHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
KFMEEVMVKFGTIDKEDINLMVLVDDPRDVVKHIMNKAREKYFHLKKFGETSFLRKLERI
HHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LKNYEAYTSV
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA