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The map label for this gene is ywhC [H]

Identifier: 15606892

GI number: 15606892

Start: 1302595

End: 1303248

Strand: Direct

Name: ywhC [H]

Synonym: aq_1853

Alternate gene names: 15606892

Gene position: 1302595-1303248 (Clockwise)

Preceding gene: 15606891

Following gene: 15606894

Centisome position: 83.97

GC content: 45.72

Gene sequence:

>654_bases
ATGTTTATGAAACCTGAAGATTTGATACTTACCATTCCCGCTTTGATGATAGCGGTTATACTCCACGAAGTAGCCCACGG
GTACGTAGCCTACAAAATGGGCGACCCAACCCCAAAAGCAGCGGGAAGGCTTACCCTAAACCCTATACCGCACATAGACC
TTTTGGGAACTATAATCCTTCCCGGGCTTTTGATGCTCGTAGGCTCTCCCATCGTCTTCGGATGGGCAAAACCCGTTCCC
ATAAACCCTTACAACTTCAAGGACCTTAAAAAGGGGATGTTCCTCACCTCCATAGCCGGAGTGGCTATGAACTTTTCCCT
CGCTGTGCTCTTCGGTATGCTGAACAGACTCCTCAGGGCTGTTGTTTACTCGGTGCCCGAAGAAGTTGCAACTTTCTTGA
TAATTCCACTAATGATCTTTACGACTAAAGTGGTTTTAATAAACCTCGTTTTAGGACTCTTTAACGCCATTCCCATACCG
CCCCTGGACGGAAGTAAAGCCCTGATGAGCCTTCTTTCTTACAAGTACTGGGAGATGTTCTACAGGTTTGAGCAGTATGG
ATTTTTAATAATTACCGTTCTCCTCTTTACAGGAGTCCTCCAGAGTATCATCCTTCCTCCATTAGTCTTTCTCTACAACC
TCATACTCAATTAG

Upstream 100 bases:

>100_bases
CACTCACCTCCTTAGCATTTTAGGATATTCAAATATCCTTATATTTTTATGATTTGAAACATGTGTTTACACCTTTTTTA
AGTGAATTACAATTAATAAG

Downstream 100 bases:

>100_bases
TGCATCATTTTCCCATGCATCTTTCTCATCATCTCCTTCCAGCTTTCTTTGTAATTGTGATACAACCAATACGCTACCGC
TTCCTTTTCCTCTTCACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MFMKPEDLILTIPALMIAVILHEVAHGYVAYKMGDPTPKAAGRLTLNPIPHIDLLGTIILPGLLMLVGSPIVFGWAKPVP
INPYNFKDLKKGMFLTSIAGVAMNFSLAVLFGMLNRLLRAVVYSVPEEVATFLIIPLMIFTTKVVLINLVLGLFNAIPIP
PLDGSKALMSLLSYKYWEMFYRFEQYGFLIITVLLFTGVLQSIILPPLVFLYNLILN

Sequences:

>Translated_217_residues
MFMKPEDLILTIPALMIAVILHEVAHGYVAYKMGDPTPKAAGRLTLNPIPHIDLLGTIILPGLLMLVGSPIVFGWAKPVP
INPYNFKDLKKGMFLTSIAGVAMNFSLAVLFGMLNRLLRAVVYSVPEEVATFLIIPLMIFTTKVVLINLVLGLFNAIPIP
PLDGSKALMSLLSYKYWEMFYRFEQYGFLIITVLLFTGVLQSIILPPLVFLYNLILN
>Mature_217_residues
MFMKPEDLILTIPALMIAVILHEVAHGYVAYKMGDPTPKAAGRLTLNPIPHIDLLGTIILPGLLMLVGSPIVFGWAKPVP
INPYNFKDLKKGMFLTSIAGVAMNFSLAVLFGMLNRLLRAVVYSVPEEVATFLIIPLMIFTTKVVLINLVLGLFNAIPIP
PLDGSKALMSLLSYKYWEMFYRFEQYGFLIITVLLFTGVLQSIILPPLVFLYNLILN

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24138; Mature: 24138

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMKPEDLILTIPALMIAVILHEVAHGYVAYKMGDPTPKAAGRLTLNPIPHIDLLGTIIL
CCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHH
PGLLMLVGSPIVFGWAKPVPINPYNFKDLKKGMFLTSIAGVAMNFSLAVLFGMLNRLLRA
HHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVYSVPEEVATFLIIPLMIFTTKVVLINLVLGLFNAIPIPPLDGSKALMSLLSYKYWEMF
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
YRFEQYGFLIITVLLFTGVLQSIILPPLVFLYNLILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFMKPEDLILTIPALMIAVILHEVAHGYVAYKMGDPTPKAAGRLTLNPIPHIDLLGTIIL
CCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHH
PGLLMLVGSPIVFGWAKPVPINPYNFKDLKKGMFLTSIAGVAMNFSLAVLFGMLNRLLRA
HHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVYSVPEEVATFLIIPLMIFTTKVVLINLVLGLFNAIPIPPLDGSKALMSLLSYKYWEMF
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
YRFEQYGFLIITVLLFTGVLQSIILPPLVFLYNLILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]