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The map label for this gene is rlpA1 [C]

Identifier: 15606566

GI number: 15606566

Start: 975229

End: 975744

Strand: Direct

Name: rlpA1 [C]

Synonym: aq_1370

Alternate gene names: 15606566

Gene position: 975229-975744 (Clockwise)

Preceding gene: 15606565

Following gene: 15606567

Centisome position: 62.86

GC content: 38.76

Gene sequence:

>516_bases
ATGATAGCTTTAATCTTCTTCCTGATTCTTTCCTTCTCTGTTTCAAAGGAATTATTTTTAGAAGATCCCCTAAAAGAGTT
CAGTGAGTTTAAACTTTTCTTAAAAGAAGAAAGAGAATATAAAAGGATTTTCCGAATTTTTAAAGTAAAAAGGGATTGCA
GGTACGAAGTTGGATACGCCTCCTGGTACGGACCTAAATTCCACTACAGGAAAACCGCAAACGGTGAGCGTTTTAACATG
TTCAAGCTTACAGCTGCTTCGCGGACGTTTTCCCTCGGAACTTACGTTCTCGTTTACAACTTAGAAAACGGCAAATTTAC
TGTTGTGAGAATTAACGACAGAGGACCATACGTGGACGGAAGGATTATAGACCTCTCTATGGCTGCTGCCGACGAAATAG
GTATGCTAAAAAAAGGTGTGGCAAAGGTTCTTGTGATACCTTTAAAGTGTCTCGCACCTTCCACTCAAGTAAAGATTTAC
GAGGAAGTAGTAAAGGACATAATGAAAACTTACTAA

Upstream 100 bases:

>100_bases
AAGGAAAACTGGAGCTTATAGAAAAGCTACTCCAGAACCCCGTAAAACTTCCCGGTGGTAAAGAAGTAAACCTGAAACCG
TACTGGTATCCTCTGGAAGC

Downstream 100 bases:

>100_bases
AATTTTCCTTATGGAAAAACCATGGTCGGGAAGGTTTAAAGAAGAAACGGATAAGTTTGTGGAAGATTTCACGGAAAGTG
TATCCTTTGATAAAGAGCTC

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIALIFFLILSFSVSKELFLEDPLKEFSEFKLFLKEEREYKRIFRIFKVKRDCRYEVGYASWYGPKFHYRKTANGERFNM
FKLTAASRTFSLGTYVLVYNLENGKFTVVRINDRGPYVDGRIIDLSMAAADEIGMLKKGVAKVLVIPLKCLAPSTQVKIY
EEVVKDIMKTY

Sequences:

>Translated_171_residues
MIALIFFLILSFSVSKELFLEDPLKEFSEFKLFLKEEREYKRIFRIFKVKRDCRYEVGYASWYGPKFHYRKTANGERFNM
FKLTAASRTFSLGTYVLVYNLENGKFTVVRINDRGPYVDGRIIDLSMAAADEIGMLKKGVAKVLVIPLKCLAPSTQVKIY
EEVVKDIMKTY
>Mature_171_residues
MIALIFFLILSFSVSKELFLEDPLKEFSEFKLFLKEEREYKRIFRIFKVKRDCRYEVGYASWYGPKFHYRKTANGERFNM
FKLTAASRTFSLGTYVLVYNLENGKFTVVRINDRGPYVDGRIIDLSMAAADEIGMLKKGVAKVLVIPLKCLAPSTQVKIY
EEVVKDIMKTY

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=130, Percent_Identity=35.3846153846154, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 19975; Mature: 19975

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALIFFLILSFSVSKELFLEDPLKEFSEFKLFLKEEREYKRIFRIFKVKRDCRYEVGYA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEE
SWYGPKFHYRKTANGERFNMFKLTAASRTFSLGTYVLVYNLENGKFTVVRINDRGPYVDG
EECCCCEEEEECCCCCEEEEEEEEECCCEEECEEEEEEEEECCCEEEEEEECCCCCEECC
RIIDLSMAAADEIGMLKKGVAKVLVIPLKCLAPSTQVKIYEEVVKDIMKTY
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIALIFFLILSFSVSKELFLEDPLKEFSEFKLFLKEEREYKRIFRIFKVKRDCRYEVGYA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEE
SWYGPKFHYRKTANGERFNMFKLTAASRTFSLGTYVLVYNLENGKFTVVRINDRGPYVDG
EECCCCEEEEECCCCCEEEEEEEEECCCEEECEEEEEEEEECCCEEEEEEECCCCCEECC
RIIDLSMAAADEIGMLKKGVAKVLVIPLKCLAPSTQVKIYEEVVKDIMKTY
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]