| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15606545
Identifier: 15606545
GI number: 15606545
Start: 957037
End: 957741
Strand: Direct
Name: 15606545
Synonym: aq_1345
Alternate gene names: NA
Gene position: 957037-957741 (Clockwise)
Preceding gene: 15606538
Following gene: 15606546
Centisome position: 61.69
GC content: 46.67
Gene sequence:
>705_bases GTGATGGGACTTTTAAAGAGGCTTTTGAGAGTTGTAAGGGCGGAAGCCCATTCGGTTGTAGAAAAGCTTGAGGACCCTAT AAAAATAACCGAAGAGGGATTGAGGGAACTCAGGAAGCAGTTAAAAGAGGCTATGGAAGCCTTGGCACAGGTAAAGGCAA GCCAGATAAGGTTTGAGAGGGAAGCCAGAAACGAAAAGGAAAGGGCCAAGGCACTCGTGAAGAAAGCCGAAAGCCTTTTA CTCCAAGCACAGGAAGGAAAGATATCACCCGAAGAGGCAGAAAAACTCGCCGCGGAACTCATCCAGAAGGCTGAACTCCA CGAAAAAAACGCAAGAAGACTGGAAGAAGAGGCAAAGAGACAGAGGGAAATGGCGGTTAAACTTCAGGCAAAGATTGACG AGCTCAAGGTCCAGATCGCAAAGTACGAGGCCGAACTAAAAACACTAAAGGCGAGACTCGCTACCGCAAGAGCGGTAAAA AAGGTAAACAAGCAAATTGCGAAAGTTGACCCTTCCGATACGATAGCCATGCTCGAGAGAATGAAGGAAAAGGTAGAAGA AGAAGAGACGCTTGCACAGGCTTACGAGGAACTTGCAAAACAGGAAGTAGCACTGGACGTGGAAAGCGAAGCGGAAAAGA AGTTAAAGGAAGTGGAGAGTAAACAGAAGTTAGAAGAATTGAAGAAGAGACTCGGTCTTTCCTGA
Upstream 100 bases:
>100_bases ATACCTTCGATTACGAGGAACTCGAAGCGAGTATATCCTCACTTGAGATATTTTTCGCAGAGTGGGGAGACGAGCTTTTA AATATCCTGAAGGAGGCTAA
Downstream 100 bases:
>100_bases GATGGGATTTCTTGAGAGGATAAAGAAACTCTTTTCGAAGGAAGAAGAAAAGCAGGAAGAAAGCATTCTCTCCAATCCTC TGGAAAGACTGAAAAAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: PspA/IM30 Family Protein; Phage Shock Protein A Pspa
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLL LQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVK KVNKQIAKVDPSDTIAMLERMKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS
Sequences:
>Translated_234_residues MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLL LQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVK KVNKQIAKVDPSDTIAMLERMKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS >Mature_234_residues MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLL LQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVK KVNKQIAKVDPSDTIAMLERMKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS
Specific function: Unknown
COG id: COG1842
COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26840; Mature: 26840
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARNEKERAKALVKKAESLLLQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVKKVNKQIAKVDPSDTIAMLER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARNEKERAKALVKKAESLLLQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVKKVNKQIAKVDPSDTIAMLER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA