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The map label for this gene is 15606530

Identifier: 15606530

GI number: 15606530

Start: 939955

End: 940638

Strand: Direct

Name: 15606530

Synonym: aq_1327

Alternate gene names: NA

Gene position: 939955-940638 (Clockwise)

Preceding gene: 15606527

Following gene: 15606532

Centisome position: 60.59

GC content: 45.61

Gene sequence:

>684_bases
ATGATACCCATAAAAGATGTAAATCCCTCCAGAACTTTTCCCATAGTTAACTTAAGCATAATAGTTGCGTGTTCGTTGAT
ATGGCTTTACGAATGGAGTCTTACGGACGAGGTTATATACACCTTTCAGGGGGCGGTTACGAAGTTTGAACTCTTCTTAA
GGGAATGGGGACTCGTGCCGGTGGAACTTCCTCAGAAGCCTTACACTCTACTCACACACATGTTCCTCCACGGTAGCTGG
GGACACATCATCGGGAACATGTGGTTCTTGTGGGTCTTTGGTGATAACGTTGAGGACAAACTCGGGAAGTTCAGGTACAT
AATCTTTTACATTCTTTGCGGACTCGGTGCTGCTCTGACGCAAACCTTTATAAGTCTTGCTTTTGGCGGTGCAAACGTCC
CCATGGTCGGGGCAAGCGGTGCGATTAGCGGAGTTCTGGGAGCTTACATGAAGATGTTTCCCCACGCAAGGGTTCTTGCA
TTAGTTCCAGTATTCATATTCCTGACTCTTATGGAACTTCCCGCGGTTATTTTCATAGGTCTGTGGTTCTTTATTCAGAT
AATTAACGGTATAATTACACTTCCCTTTATAGGCTACGGAGGAGTAGCTTGGTACGCCCACATAGGCGGTTTCATAACGG
GCTACCTGCTGGTTGATTACTTCAGGAAAAGGAGTTATTCCTAA

Upstream 100 bases:

>100_bases
TTCGGGATTAACCTCTCTATGAGAGTAGTTTTCCCTACGTTGTGCTTCCCTACGAAAGCAATTACTTTCATATTTTTCTC
CTATAAAATGTATTTTTACT

Downstream 100 bases:

>100_bases
AACTCCACTTCCTCGTAATTCAGAATTTCTTCCAGTATCTCCTTCTTCTTCATCCTTATTGCCTTGTTTCCCAATAGGTA
GAGCCCTGTGGCGAAGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Transmembrane Rhomboid Family Protein; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIPIKDVNPSRTFPIVNLSIIVACSLIWLYEWSLTDEVIYTFQGAVTKFELFLREWGLVPVELPQKPYTLLTHMFLHGSW
GHIIGNMWFLWVFGDNVEDKLGKFRYIIFYILCGLGAALTQTFISLAFGGANVPMVGASGAISGVLGAYMKMFPHARVLA
LVPVFIFLTLMELPAVIFIGLWFFIQIINGIITLPFIGYGGVAWYAHIGGFITGYLLVDYFRKRSYS

Sequences:

>Translated_227_residues
MIPIKDVNPSRTFPIVNLSIIVACSLIWLYEWSLTDEVIYTFQGAVTKFELFLREWGLVPVELPQKPYTLLTHMFLHGSW
GHIIGNMWFLWVFGDNVEDKLGKFRYIIFYILCGLGAALTQTFISLAFGGANVPMVGASGAISGVLGAYMKMFPHARVLA
LVPVFIFLTLMELPAVIFIGLWFFIQIINGIITLPFIGYGGVAWYAHIGGFITGYLLVDYFRKRSYS
>Mature_227_residues
MIPIKDVNPSRTFPIVNLSIIVACSLIWLYEWSLTDEVIYTFQGAVTKFELFLREWGLVPVELPQKPYTLLTHMFLHGSW
GHIIGNMWFLWVFGDNVEDKLGKFRYIIFYILCGLGAALTQTFISLAFGGANVPMVGASGAISGVLGAYMKMFPHARVLA
LVPVFIFLTLMELPAVIFIGLWFFIQIINGIITLPFIGYGGVAWYAHIGGFITGYLLVDYFRKRSYS

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25595; Mature: 25595

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIKDVNPSRTFPIVNLSIIVACSLIWLYEWSLTDEVIYTFQGAVTKFELFLREWGLVP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE
VELPQKPYTLLTHMFLHGSWGHIIGNMWFLWVFGDNVEDKLGKFRYIIFYILCGLGAALT
EECCCCHHHHHHHHHHCCCHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHH
QTFISLAFGGANVPMVGASGAISGVLGAYMKMFPHARVLALVPVFIFLTLMELPAVIFIG
HHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LWFFIQIINGIITLPFIGYGGVAWYAHIGGFITGYLLVDYFRKRSYS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPIKDVNPSRTFPIVNLSIIVACSLIWLYEWSLTDEVIYTFQGAVTKFELFLREWGLVP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE
VELPQKPYTLLTHMFLHGSWGHIIGNMWFLWVFGDNVEDKLGKFRYIIFYILCGLGAALT
EECCCCHHHHHHHHHHCCCHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHH
QTFISLAFGGANVPMVGASGAISGVLGAYMKMFPHARVLALVPVFIFLTLMELPAVIFIG
HHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LWFFIQIINGIITLPFIGYGGVAWYAHIGGFITGYLLVDYFRKRSYS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA