Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is 15606226

Identifier: 15606226

GI number: 15606226

Start: 617125

End: 617976

Strand: Direct

Name: 15606226

Synonym: aq_893

Alternate gene names: NA

Gene position: 617125-617976 (Clockwise)

Preceding gene: 15606225

Following gene: 15606229

Centisome position: 39.78

GC content: 45.19

Gene sequence:

>852_bases
ATGAGGGCTCATCCCGAGTGCATTCCCTGTCTTATAAATCAGGGCCTGAACGCCGTAAAGAAGTTAAACCTTCCAAAAGA
AAAGGAAATGGAAATAGCAACAAGGAGTTTAAAGTTCCTCTCCCAATTTGACACCTTTGACCGCTCCCCCGCTTACTACG
CCTACTTCATCCAGCAAATAGTGAAGGAAATTTCAGGAGAAGAGGACCCATTTAAAGACCTTAAAAAACTTGCAAACGAG
AAAGCTCAGGAACTCCTGTCTAAAGTTCTCAAAGGAACACCCGACCTGAAGGAGGCTCTCAAGCTCTCCGCAATCGGAAA
CTTCATAGACTTCGCCATAAAAGGTGTGTTTGACCTTGAAAGGGAACTCCAAAAACTACTGGACAAAGATTTCCTGATTT
TTGATTACGATAAGTTTCTTGAAAGGCTTGAGAACGCCAAAAGTGTTTTCATAATAGGGGACAACGCGGGAGAGATAGTC
TTTGACAAGGTCCTCGTAAAAACCTTAAAAGGCATGGGAAAGGAGGTCGTTTACGGAGTAAAGGGAAAACCAATTCTGAA
CGACGCCACTCTGGAAGACGCGGAAGAAGTATCCATGACACGGCTTTGCAAGGTAATAGACAACGGCTCGGACAAGGTGG
GAACGTGGCTTGAAGACTGCAAAAGGGAGTTTGTGGAAACCTTTTACAGTTCTGACATAGTTATAAGCAAGGGACAGGCT
AACTTTGAGACCTTGAGCAGTGCGGACAGGGACCTTTTCTTCCTCCTCGTTGCAAAGTGTGACCCCATAGGAAGGGAAAC
GGGAGGGAAGAGAGGAGAGCTCATATTCAAGTACAAGCCCTCAAAGGATTAA

Upstream 100 bases:

>100_bases
AGAACGTTCTCTCAAAACTCATACAGCAAACGCTCCCGAACGTGAGGGTGTTTAACGTTGAAAAACCAGAAGATGCGGAA
AGCGTTTTAAAGGCGATAAC

Downstream 100 bases:

>100_bases
CATCCCGTCCCCGTAGCTGTAAAACCTGTATCTCTTTTCCACGGCTTCCCTGTAAGCCTTAAGTATAAACTCCCTTCCCG
CAAAAGCTGAAACGAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRAHPECIPCLINQGLNAVKKLNLPKEKEMEIATRSLKFLSQFDTFDRSPAYYAYFIQQIVKEISGEEDPFKDLKKLANE
KAQELLSKVLKGTPDLKEALKLSAIGNFIDFAIKGVFDLERELQKLLDKDFLIFDYDKFLERLENAKSVFIIGDNAGEIV
FDKVLVKTLKGMGKEVVYGVKGKPILNDATLEDAEEVSMTRLCKVIDNGSDKVGTWLEDCKREFVETFYSSDIVISKGQA
NFETLSSADRDLFFLLVAKCDPIGRETGGKRGELIFKYKPSKD

Sequences:

>Translated_283_residues
MRAHPECIPCLINQGLNAVKKLNLPKEKEMEIATRSLKFLSQFDTFDRSPAYYAYFIQQIVKEISGEEDPFKDLKKLANE
KAQELLSKVLKGTPDLKEALKLSAIGNFIDFAIKGVFDLERELQKLLDKDFLIFDYDKFLERLENAKSVFIIGDNAGEIV
FDKVLVKTLKGMGKEVVYGVKGKPILNDATLEDAEEVSMTRLCKVIDNGSDKVGTWLEDCKREFVETFYSSDIVISKGQA
NFETLSSADRDLFFLLVAKCDPIGRETGGKRGELIFKYKPSKD
>Mature_283_residues
MRAHPECIPCLINQGLNAVKKLNLPKEKEMEIATRSLKFLSQFDTFDRSPAYYAYFIQQIVKEISGEEDPFKDLKKLANE
KAQELLSKVLKGTPDLKEALKLSAIGNFIDFAIKGVFDLERELQKLLDKDFLIFDYDKFLERLENAKSVFIIGDNAGEIV
FDKVLVKTLKGMGKEVVYGVKGKPILNDATLEDAEEVSMTRLCKVIDNGSDKVGTWLEDCKREFVETFYSSDIVISKGQA
NFETLSSADRDLFFLLVAKCDPIGRETGGKRGELIFKYKPSKD

Specific function: Unknown

COG id: COG1578

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002791
- InterPro:   IPR014444 [H]

Pfam domain/function: PF01937 DUF89 [H]

EC number: NA

Molecular weight: Translated: 32036; Mature: 32036

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAHPECIPCLINQGLNAVKKLNLPKEKEMEIATRSLKFLSQFDTFDRSPAYYAYFIQQI
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VKEISGEEDPFKDLKKLANEKAQELLSKVLKGTPDLKEALKLSAIGNFIDFAIKGVFDLE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RELQKLLDKDFLIFDYDKFLERLENAKSVFIIGDNAGEIVFDKVLVKTLKGMGKEVVYGV
HHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHEEECC
KGKPILNDATLEDAEEVSMTRLCKVIDNGSDKVGTWLEDCKREFVETFYSSDIVISKGQA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC
NFETLSSADRDLFFLLVAKCDPIGRETGGKRGELIFKYKPSKD
CHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MRAHPECIPCLINQGLNAVKKLNLPKEKEMEIATRSLKFLSQFDTFDRSPAYYAYFIQQI
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VKEISGEEDPFKDLKKLANEKAQELLSKVLKGTPDLKEALKLSAIGNFIDFAIKGVFDLE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RELQKLLDKDFLIFDYDKFLERLENAKSVFIIGDNAGEIVFDKVLVKTLKGMGKEVVYGV
HHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHEEECC
KGKPILNDATLEDAEEVSMTRLCKVIDNGSDKVGTWLEDCKREFVETFYSSDIVISKGQA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC
NFETLSSADRDLFFLLVAKCDPIGRETGGKRGELIFKYKPSKD
CHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]