| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is yrrL [H]
Identifier: 15606156
GI number: 15606156
Start: 535610
End: 536590
Strand: Direct
Name: yrrL [H]
Synonym: aq_775
Alternate gene names: 15606156
Gene position: 535610-536590 (Clockwise)
Preceding gene: 15606155
Following gene: 15606162
Centisome position: 34.53
GC content: 42.81
Gene sequence:
>981_bases TTGAGGCGTTTTTTAATCCTCCTGTACGTGTTCCTTGTAAGTTCAGTTCTCGGCTTTATAGCCTTTGAGATATTCACACC CCTTTACGTTCCAAAGAAAACCGTTGAAATAAAGTACGGGACTCCCGTTCCGGAAATAGCCCAGATTTTAGAAGAAAATA AAGTTATAAAGAACAAGTACTACTTTCTCATACTCCACGCCTTTAAGAGGGGAAAGCTGGAAGCGGGCGAGTACGAGTTT GAAGGGTGGTTGAGCACGTACGACGTTTACAAAATCCTTGAAGAGGGAAAGGCAAAACTCTACAAGGTTACTGTAAAGGA AGGTTACGACGTATTTGACATAGCAAAAGTTCTGGAAGAAAACGGAATTTGTAAAGAAGAAGACTTTTTGAAGTACGCCC TTTCGGAAGAGGTTGCGAGGAAGTATAACTTGAGCGTGCCCTCCATGGAGGGTTTTCTCTTTCCGGATACATATTACCTT TCCAGGAATATGCACCCCTTAAAGGTTATAGACATTATGTACAAAAACTTCCTCGAAAAAACGGAAGAAATGAGAATGGA ACTGAGGAAAAAGCACATATCTCTGGAAACCTGGGTAACGGTTGCCTCAATGGTCGAAAAGGAAACCCACCTGGATGAAG AAAAACCCCTTATAGCAGCGGTGATATACAACAGGCTGAAAAAAGGAATGAAGCTCCAGATAGACCCTACCGTTATATAC GTTGCGAAAAGAAGAGGTATATGGAAGGGGGAACTCTACAAGAGTCTTTATAAAATAGACGACCCTTACAACACTTACAT GTACTACGGACTTCCGCCGGGACCAATATCTAACCCCGGACTTTCTTCACTAAGGGCAGCGCTCTACCCTGCGAAGGTAA ATTACCTGTACTTTGTAGCAAAACCCGGATACAAGGGACACCTTTTTGCTGAAACTTACCTTGAACACCTCAGGAATATG AGAAGGGTAGGAAGACGCTAA
Upstream 100 bases:
>100_bases GCACTAAGGGAAATGAGGAATTTTTCGTTTTGGCTGGGAGAAAAGGGGAGGAAGTAAACTTATCCGAGGCGATAGAGAAA GCCCTTGAGGAGGTAGTGGA
Downstream 100 bases:
>100_bases AGCTCAAAAAGGTCCCTCGTTATTATTGTGTCCCTTCTGTAAACTTCCCTTTCTGTAGGGTAGTCCTTCCTGTAGTGTAC TCCCCTGCTTTCCTTTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKYYFLILHAFKRGKLEAGEYEF EGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEENGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYL SRNMHPLKVIDIMYKNFLEKTEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVAKPGYKGHLFAETYLEHLRNM RRVGRR
Sequences:
>Translated_326_residues MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKYYFLILHAFKRGKLEAGEYEF EGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEENGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYL SRNMHPLKVIDIMYKNFLEKTEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVAKPGYKGHLFAETYLEHLRNM RRVGRR >Mature_326_residues MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKYYFLILHAFKRGKLEAGEYEF EGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEENGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYL SRNMHPLKVIDIMYKNFLEKTEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVAKPGYKGHLFAETYLEHLRNM RRVGRR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=295, Percent_Identity=32.8813559322034, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38291; Mature: 38291
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKY CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHH YFLILHAFKRGKLEAGEYEFEGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEE EEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHH NGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYLSRNMHPLKVIDIMYKNFLEK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCHHHHHHHHHHHHHHH TEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCEEEE VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVA EECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEEE KPGYKGHLFAETYLEHLRNMRRVGRR CCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKY CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHH YFLILHAFKRGKLEAGEYEFEGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEE EEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHH NGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYLSRNMHPLKVIDIMYKNFLEK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCHHHHHHHHHHHHHHH TEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCEEEE VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVA EECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEEE KPGYKGHLFAETYLEHLRNMRRVGRR CCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]