Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is yrrL [H]

Identifier: 15606156

GI number: 15606156

Start: 535610

End: 536590

Strand: Direct

Name: yrrL [H]

Synonym: aq_775

Alternate gene names: 15606156

Gene position: 535610-536590 (Clockwise)

Preceding gene: 15606155

Following gene: 15606162

Centisome position: 34.53

GC content: 42.81

Gene sequence:

>981_bases
TTGAGGCGTTTTTTAATCCTCCTGTACGTGTTCCTTGTAAGTTCAGTTCTCGGCTTTATAGCCTTTGAGATATTCACACC
CCTTTACGTTCCAAAGAAAACCGTTGAAATAAAGTACGGGACTCCCGTTCCGGAAATAGCCCAGATTTTAGAAGAAAATA
AAGTTATAAAGAACAAGTACTACTTTCTCATACTCCACGCCTTTAAGAGGGGAAAGCTGGAAGCGGGCGAGTACGAGTTT
GAAGGGTGGTTGAGCACGTACGACGTTTACAAAATCCTTGAAGAGGGAAAGGCAAAACTCTACAAGGTTACTGTAAAGGA
AGGTTACGACGTATTTGACATAGCAAAAGTTCTGGAAGAAAACGGAATTTGTAAAGAAGAAGACTTTTTGAAGTACGCCC
TTTCGGAAGAGGTTGCGAGGAAGTATAACTTGAGCGTGCCCTCCATGGAGGGTTTTCTCTTTCCGGATACATATTACCTT
TCCAGGAATATGCACCCCTTAAAGGTTATAGACATTATGTACAAAAACTTCCTCGAAAAAACGGAAGAAATGAGAATGGA
ACTGAGGAAAAAGCACATATCTCTGGAAACCTGGGTAACGGTTGCCTCAATGGTCGAAAAGGAAACCCACCTGGATGAAG
AAAAACCCCTTATAGCAGCGGTGATATACAACAGGCTGAAAAAAGGAATGAAGCTCCAGATAGACCCTACCGTTATATAC
GTTGCGAAAAGAAGAGGTATATGGAAGGGGGAACTCTACAAGAGTCTTTATAAAATAGACGACCCTTACAACACTTACAT
GTACTACGGACTTCCGCCGGGACCAATATCTAACCCCGGACTTTCTTCACTAAGGGCAGCGCTCTACCCTGCGAAGGTAA
ATTACCTGTACTTTGTAGCAAAACCCGGATACAAGGGACACCTTTTTGCTGAAACTTACCTTGAACACCTCAGGAATATG
AGAAGGGTAGGAAGACGCTAA

Upstream 100 bases:

>100_bases
GCACTAAGGGAAATGAGGAATTTTTCGTTTTGGCTGGGAGAAAAGGGGAGGAAGTAAACTTATCCGAGGCGATAGAGAAA
GCCCTTGAGGAGGTAGTGGA

Downstream 100 bases:

>100_bases
AGCTCAAAAAGGTCCCTCGTTATTATTGTGTCCCTTCTGTAAACTTCCCTTTCTGTAGGGTAGTCCTTCCTGTAGTGTAC
TCCCCTGCTTTCCTTTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKYYFLILHAFKRGKLEAGEYEF
EGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEENGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYL
SRNMHPLKVIDIMYKNFLEKTEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY
VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVAKPGYKGHLFAETYLEHLRNM
RRVGRR

Sequences:

>Translated_326_residues
MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKYYFLILHAFKRGKLEAGEYEF
EGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEENGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYL
SRNMHPLKVIDIMYKNFLEKTEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY
VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVAKPGYKGHLFAETYLEHLRNM
RRVGRR
>Mature_326_residues
MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKYYFLILHAFKRGKLEAGEYEF
EGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEENGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYL
SRNMHPLKVIDIMYKNFLEKTEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY
VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVAKPGYKGHLFAETYLEHLRNM
RRVGRR

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=295, Percent_Identity=32.8813559322034, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 38291; Mature: 38291

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHH
YFLILHAFKRGKLEAGEYEFEGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEE
EEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHH
NGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYLSRNMHPLKVIDIMYKNFLEK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCHHHHHHHHHHHHHHH
TEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCEEEE
VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVA
EECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEEE
KPGYKGHLFAETYLEHLRNMRRVGRR
CCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRFLILLYVFLVSSVLGFIAFEIFTPLYVPKKTVEIKYGTPVPEIAQILEENKVIKNKY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHH
YFLILHAFKRGKLEAGEYEFEGWLSTYDVYKILEEGKAKLYKVTVKEGYDVFDIAKVLEE
EEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHH
NGICKEEDFLKYALSEEVARKYNLSVPSMEGFLFPDTYYLSRNMHPLKVIDIMYKNFLEK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCHHHHHHHHHHHHHHH
TEEMRMELRKKHISLETWVTVASMVEKETHLDEEKPLIAAVIYNRLKKGMKLQIDPTVIY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCEEEE
VAKRRGIWKGELYKSLYKIDDPYNTYMYYGLPPGPISNPGLSSLRAALYPAKVNYLYFVA
EECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEEE
KPGYKGHLFAETYLEHLRNMRRVGRR
CCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]