Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is 15606124

Identifier: 15606124

GI number: 15606124

Start: 506732

End: 507745

Strand: Direct

Name: 15606124

Synonym: aq_729

Alternate gene names: NA

Gene position: 506732-507745 (Clockwise)

Preceding gene: 15606123

Following gene: 15606125

Centisome position: 32.66

GC content: 44.38

Gene sequence:

>1014_bases
GTGATTACCTTTACATACTTTCCGCTGGAGCTTACACCACCGTTTACGCTTCAAACTTCAACGGCTTTCCTAAACCTGAG
GTTGTTCCTTTTTAGAAATAAATTCAATCTTATGAATAAGTACCCCTCTTATTTGAACCTCTATGAGAGCGGAGAGCTGG
AAAAGAGGGTGGAAAAAGCCCTTAATATGCTTGAAAAGTGTAAGGTTTGTCCCCATACCTGCGGTGTAAACAGGCTGGAA
GATGACAAAAAGGGATACTGTAAAGTAGGAAGGTACGCTGTGGTCGCCGACTACTTTCCCCACTTCGGCGAGGAATTTCC
CATAAGGGGATACAGGGGAAGCGGGACGATATTCTTCTCTTACTGCAACATGAGGTGTGTTTACTGCCAGAACTACGATG
TCAGCCACTTGGGCGCGGGAAGGATTATGAAACCCGAGGACCTCGCAGAAGTTATGCTGGAACTTCAGGACTACGGTTGC
CATAACATAAACCTCGTTTCTCCTTCCCACGTAGTTCCCCAGATACTCGAAGCCCTCCTAATAGCGGTAGAAAGAGGACT
TAGAATTCCAATAGTTTACAATACATCTTCCTTTGACTCTCTGGAAACCTTAAAACTTCTTGATGGAATAGTTGACATAT
ACCTCGCGGATTTAAAGTACCTAAACAAAGAGTACGGGAGGAAGTACTCAAAGGTGAAAGATTACCCATCTGTCGCAAAG
GAAGCGATAAGGGAAATGTACAGGCAGGTGGGAAACCTGGAAGTGGACGAAAGGGGTATAGCTGTAAGGGGGCTGCTCGT
TAGACACCTCGTTCTTCCAAACGACATATCCACCACAAAGGAGGTTATGGAATTCTTAAGAAGTATTGATCCAAAGCTTG
CGGTAAACGTTATGAAGCAGTATCACCCATACTACAAAGCGTGGGATTATCCCGAACTTTCCAGAAGAATAACGGAAGAA
GAATACAAAAAAGCCCTTGAAGAAGCTCAAGGCTTTACCCTGATTGTGGATTAA

Upstream 100 bases:

>100_bases
GAAAGGGAAGGGGAACTGAAGGAGTGGACAATAGGCGGTGTTTCCTGCGACAGTATGGACGTAGTGGCTAAGAACGTTTA
CCTTCCAGAACCTGAAGTAG

Downstream 100 bases:

>100_bases
AATAATCAATTATGGATGTAACCGTAATAAGTGCCTTTCTGGGCGGACTCCTTTCCTTTCTATCTCCCTGTATCCTTCCG
ATAATCCCTGCGTACCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MITFTYFPLELTPPFTLQTSTAFLNLRLFLFRNKFNLMNKYPSYLNLYESGELEKRVEKALNMLEKCKVCPHTCGVNRLE
DDKKGYCKVGRYAVVADYFPHFGEEFPIRGYRGSGTIFFSYCNMRCVYCQNYDVSHLGAGRIMKPEDLAEVMLELQDYGC
HNINLVSPSHVVPQILEALLIAVERGLRIPIVYNTSSFDSLETLKLLDGIVDIYLADLKYLNKEYGRKYSKVKDYPSVAK
EAIREMYRQVGNLEVDERGIAVRGLLVRHLVLPNDISTTKEVMEFLRSIDPKLAVNVMKQYHPYYKAWDYPELSRRITEE
EYKKALEEAQGFTLIVD

Sequences:

>Translated_337_residues
MITFTYFPLELTPPFTLQTSTAFLNLRLFLFRNKFNLMNKYPSYLNLYESGELEKRVEKALNMLEKCKVCPHTCGVNRLE
DDKKGYCKVGRYAVVADYFPHFGEEFPIRGYRGSGTIFFSYCNMRCVYCQNYDVSHLGAGRIMKPEDLAEVMLELQDYGC
HNINLVSPSHVVPQILEALLIAVERGLRIPIVYNTSSFDSLETLKLLDGIVDIYLADLKYLNKEYGRKYSKVKDYPSVAK
EAIREMYRQVGNLEVDERGIAVRGLLVRHLVLPNDISTTKEVMEFLRSIDPKLAVNVMKQYHPYYKAWDYPELSRRITEE
EYKKALEEAQGFTLIVD
>Mature_337_residues
MITFTYFPLELTPPFTLQTSTAFLNLRLFLFRNKFNLMNKYPSYLNLYESGELEKRVEKALNMLEKCKVCPHTCGVNRLE
DDKKGYCKVGRYAVVADYFPHFGEEFPIRGYRGSGTIFFSYCNMRCVYCQNYDVSHLGAGRIMKPEDLAEVMLELQDYGC
HNINLVSPSHVVPQILEALLIAVERGLRIPIVYNTSSFDSLETLKLLDGIVDIYLADLKYLNKEYGRKYSKVKDYPSVAK
EAIREMYRQVGNLEVDERGIAVRGLLVRHLVLPNDISTTKEVMEFLRSIDPKLAVNVMKQYHPYYKAWDYPELSRRITEE
EYKKALEEAQGFTLIVD

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39100; Mature: 39100

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFTYFPLELTPPFTLQTSTAFLNLRLFLFRNKFNLMNKYPSYLNLYESGELEKRVEKA
CEEEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH
LNMLEKCKVCPHTCGVNRLEDDKKGYCKVGRYAVVADYFPHFGEEFPIRGYRGSGTIFFS
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEE
YCNMRCVYCQNYDVSHLGAGRIMKPEDLAEVMLELQDYGCHNINLVSPSHVVPQILEALL
ECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
IAVERGLRIPIVYNTSSFDSLETLKLLDGIVDIYLADLKYLNKEYGRKYSKVKDYPSVAK
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHH
EAIREMYRQVGNLEVDERGIAVRGLLVRHLVLPNDISTTKEVMEFLRSIDPKLAVNVMKQ
HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
YHPYYKAWDYPELSRRITEEEYKKALEEAQGFTLIVD
HCCHHHCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MITFTYFPLELTPPFTLQTSTAFLNLRLFLFRNKFNLMNKYPSYLNLYESGELEKRVEKA
CEEEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH
LNMLEKCKVCPHTCGVNRLEDDKKGYCKVGRYAVVADYFPHFGEEFPIRGYRGSGTIFFS
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEE
YCNMRCVYCQNYDVSHLGAGRIMKPEDLAEVMLELQDYGCHNINLVSPSHVVPQILEALL
ECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
IAVERGLRIPIVYNTSSFDSLETLKLLDGIVDIYLADLKYLNKEYGRKYSKVKDYPSVAK
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHH
EAIREMYRQVGNLEVDERGIAVRGLLVRHLVLPNDISTTKEVMEFLRSIDPKLAVNVMKQ
HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
YHPYYKAWDYPELSRRITEEEYKKALEEAQGFTLIVD
HCCHHHCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]