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The map label for this gene is ccdA [H]

Identifier: 15606125

GI number: 15606125

Start: 507757

End: 508590

Strand: Direct

Name: ccdA [H]

Synonym: aq_731

Alternate gene names: 15606125

Gene position: 507757-508590 (Clockwise)

Preceding gene: 15606124

Following gene: 15606126

Centisome position: 32.73

GC content: 45.08

Gene sequence:

>834_bases
ATGGATGTAACCGTAATAAGTGCCTTTCTGGGCGGACTCCTTTCCTTTCTATCTCCCTGTATCCTTCCGATAATCCCTGC
GTACCTCTCCTACATTTCTGGTGTCGGAGTAAGTGACGTAGAAACTCAAAAGGGAAAAGTGAACTGGAAAGTGTTCTTTT
CAGCCCTATACTTTGTCCTCGGATTTACGCTTGTCTTTACGGGACTTGGCGCAAGTGCGACTTTTGTGGGGCAGCTTCTT
CACGATTATCAGGAATGGATAATAAGGGTGGGAAGCGGACTCGTGATATTCTTCGGTCTCCACTTTGCGGGAGTGTTTTT
ATGGAAGCACTTCCTGAAGGTTTACATACCGATAGGTATCTTAATTCCCGTTCTTTACTTCTTAAAACTCCTCTCATGGA
ACGAGTTCTTTAACTTGATGTTTGCCTACGCGGTAGTTTTAATCCTTTACCTCGTAAAAGCTCACGAGTTTTTATACAGG
CAGTTAAAGATAGAGGCAAAGGCGGAAATTTCTTACTTGGGAGCCTTCTTAATGGGGGTAGTTTTTGCCTTCGGGTGGAG
TCCCTGTATAGGGCCCGTTCTCGGTTCCATTCTCTTCCTCGCCTCTCAGCAGGAGACCGTAGCAAAAGGAGCTCTTCTAC
TTTTCGTTTACTCAATAGGTCTCGGAATACCCTTTCTCCTTGCAGGACTCCTCTTTTCCCTATTCCTTAACTTTGTGAGG
TCCTTTTCAAGGTACTTCAAGTACGTGGAAATTGCGGGCGGTGTTCTGCTTGTTTCCTTGGGACTTCTTCTCGCACTGGA
TAAGCTCTCACTTATTGCTAACATTACTTTCTGA

Upstream 100 bases:

>100_bases
ATTATCCCGAACTTTCCAGAAGAATAACGGAAGAAGAATACAAAAAAGCCCTTGAAGAAGCTCAAGGCTTTACCCTGATT
GTGGATTAAAATAATCAATT

Downstream 100 bases:

>100_bases
TGAGGACTGTTGTAATAGACTATGGAATGGGCAACTTAAGGAGTGTCAGTAAAGCTCTTGAGGCGGTAGGATTTCCCGAA
GTAGTAGTCTCAAACGATTA

Product: cytochrome C-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDVTVISAFLGGLLSFLSPCILPIIPAYLSYISGVGVSDVETQKGKVNWKVFFSALYFVLGFTLVFTGLGASATFVGQLL
HDYQEWIIRVGSGLVIFFGLHFAGVFLWKHFLKVYIPIGILIPVLYFLKLLSWNEFFNLMFAYAVVLILYLVKAHEFLYR
QLKIEAKAEISYLGAFLMGVVFAFGWSPCIGPVLGSILFLASQQETVAKGALLLFVYSIGLGIPFLLAGLLFSLFLNFVR
SFSRYFKYVEIAGGVLLVSLGLLLALDKLSLIANITF

Sequences:

>Translated_277_residues
MDVTVISAFLGGLLSFLSPCILPIIPAYLSYISGVGVSDVETQKGKVNWKVFFSALYFVLGFTLVFTGLGASATFVGQLL
HDYQEWIIRVGSGLVIFFGLHFAGVFLWKHFLKVYIPIGILIPVLYFLKLLSWNEFFNLMFAYAVVLILYLVKAHEFLYR
QLKIEAKAEISYLGAFLMGVVFAFGWSPCIGPVLGSILFLASQQETVAKGALLLFVYSIGLGIPFLLAGLLFSLFLNFVR
SFSRYFKYVEIAGGVLLVSLGLLLALDKLSLIANITF
>Mature_277_residues
MDVTVISAFLGGLLSFLSPCILPIIPAYLSYISGVGVSDVETQKGKVNWKVFFSALYFVLGFTLVFTGLGASATFVGQLL
HDYQEWIIRVGSGLVIFFGLHFAGVFLWKHFLKVYIPIGILIPVLYFLKLLSWNEFFNLMFAYAVVLILYLVKAHEFLYR
QLKIEAKAEISYLGAFLMGVVFAFGWSPCIGPVLGSILFLASQQETVAKGALLLFVYSIGLGIPFLLAGLLFSLFLNFVR
SFSRYFKYVEIAGGVLLVSLGLLLALDKLSLIANITF

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 30698; Mature: 30698

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]