| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is yfeA [H]
Identifier: 15606053
GI number: 15606053
Start: 420088
End: 420924
Strand: Direct
Name: yfeA [H]
Synonym: aq_619
Alternate gene names: 15606053
Gene position: 420088-420924 (Clockwise)
Preceding gene: 15606052
Following gene: 15606054
Centisome position: 27.08
GC content: 39.67
Gene sequence:
>837_bases ATGAAGAAATTTTTAATAATCCTCTTATCCTTCGTTCTTTTCGTATTCCCTGAGGATCTTATTCTCGTGAGCATTTATCC CTTTTACGACGTTGTAAAAGACATAAGCGGGAAGTATTACAGAGTTGAGAGTTTAGTTCCTCCGAAAGCGGATTACCACG TTTACGAATTGACACCAAGAGAACTCATAAAACTCTACAGGGCAAAAGTCGTTTTCGTTAGCGGTGTTCCCTTAGGAGAG TGGGAAGAGAAGGTGGAGAAAATAGCCAAGGGCAAAGTTTACTCCCTGTCAAAAGGCATAGAGCTAATCACCTACGGACA CGAAGAATTAGGGAAGGATCCTCATTTCTGGGTATCTCCAAAAAGAATGCTAAAAGTGGCTAAAAACGTAGAAGAAGCCC TCACGGAAACCTTTAAAAAGAACTTTTCTGAAAATTACAAAAACGTTGAGCAAGAGCTGAAAAAACTGGATGAAGCTTAC ACGAAAACGCTTTCCAAGTGCGAGTATAAAAAGTTCGGAGCAGTTCACGGAGCCTTCGGATACCTTGCGAAAGACTACGG ACTTGAACAGGTACTCCTCAGGGAGGAGCACGGACACGGTGATATATCTCCATCTGAACTGAAAAAACTTGTAAAACTCA TAAAGAAAAAGGAAATAAAGGTAGTTTTAATTCCTAAAGGTGTGCACTCAAAGTTTGCAGAAATATTGAAGGAAACGTAC AACATCACCGTTTACGAGGTAAACGTTAAGATAATCCCGGAAGAGGAGGGAGATAATTATTACAAAATTATGGAAAGGAA CTTAAAAGTTTTAAAAGAAGCTCTCAAATGCGGGTAA
Upstream 100 bases:
>100_bases ACACGGGGAAACCCGTGGAAGTTGACGGCAACCTTATTACCGCAACCGATCCCAAGTCCATGCTTGAGATGATGAAGGTG ATTATATCGAGGCTAAAGTA
Downstream 100 bases:
>100_bases TAGAAGTAAAAAATCTTACCTTTTCATACGACGGTAAACACAACGTCCTTGAAGACGTTTCTTTTTACGTAGAAAAGGGA GACTTTTTGGGGATAGTTGG
Product: adhesion B precursor
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPRELIKLYRAKVVFVSGVPLGE WEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSPKRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAY TKTLSKCEYKKFGAVHGAFGYLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG
Sequences:
>Translated_278_residues MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPRELIKLYRAKVVFVSGVPLGE WEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSPKRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAY TKTLSKCEYKKFGAVHGAFGYLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG >Mature_278_residues MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPRELIKLYRAKVVFVSGVPLGE WEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSPKRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAY TKTLSKCEYKKFGAVHGAFGYLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG
Specific function: Part of the ATP-driven transport system AdcABC for zinc. Required for transformability [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR012674 - InterPro: IPR011038 - InterPro: IPR006128 - InterPro: IPR015304 [H]
Pfam domain/function: PF01297 SBP_bac_9; PF09223 YodA [H]
EC number: NA
Molecular weight: Translated: 32207; Mature: 32207
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPR CHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCHH ELIKLYRAKVVFVSGVPLGEWEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSP HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEHHCCCEEEEECHHHHCCCCCEEECH KRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAYTKTLSKCEYKKFGAVHGAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY HHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPR CHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCHH ELIKLYRAKVVFVSGVPLGEWEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSP HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEHHCCCEEEEECHHHHCCCCCEEECH KRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAYTKTLSKCEYKKFGAVHGAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY HHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]