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The map label for this gene is ygaF [H]

Identifier: 15605968

GI number: 15605968

Start: 332980

End: 333465

Strand: Direct

Name: ygaF [H]

Synonym: aq_495

Alternate gene names: 15605968

Gene position: 332980-333465 (Clockwise)

Preceding gene: 15605961

Following gene: 15605969

Centisome position: 21.46

GC content: 43.21

Gene sequence:

>486_bases
ATGCTAAAAGAAGGAGATAAGGTTCCCAGTTTCTGCCTTCCCGGGATAGACGAGGAAGTAAACGAAAGGGAGATTTGCAT
AGATGAGTTTAAGGGAAAGAAAGTAATCCTCTACTTTTACCCCAAGGACAATACGCCCGGTTGCACACAGGAAGCCTGCG
ACTTCAGGGATAACCTGAACCTTTTAAAGGAAATGGGATACGTCGTGATAGGCGTAAGTCCTGACAGCACAGCATCCCAC
AAAAAGTTCAAGGAAAAGTATGGACTGAACTTTATACTCCTTTCGGACAAGGATAAAAAAGTAGCCGAAATGTTCGGGGT
TTACGGGGAAAAGAAGGCTTACGGCAAGGTAACTAAAGGGATTATACGTTCAACTTTTCTTATAGACGAAGAGGGGAGGA
TAATAAAGGAATGGCGAAACGTAAAGGCAAAGGGACACGTAGCGAAAGTAATAGAAACCTTGAAGAGCTTAGAAGAAAAG
CAGTAG

Upstream 100 bases:

>100_bases
AACCAGAAAGGCAAAAGCCAAAGAAACGGCTACTACAAAGGCTCCGAGTTTTAATTCTGTAGTGAGTCTCATTCTATGAG
AATAGTTTATAATACTAAAC

Downstream 100 bases:

>100_bases
AAATAGTAAAGAGACTAGAAAAAGTTTACCTCAACCCGAGGCTCGAACTGGAGTACGAAAATGCCTTTCAGCTCCTCGTT
ATGGCTATACTCGCAGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLKEGDKVPSFCLPGIDEEVNEREICIDEFKGKKVILYFYPKDNTPGCTQEACDFRDNLNLLKEMGYVVIGVSPDSTASH
KKFKEKYGLNFILLSDKDKKVAEMFGVYGEKKAYGKVTKGIIRSTFLIDEEGRIIKEWRNVKAKGHVAKVIETLKSLEEK
Q

Sequences:

>Translated_161_residues
MLKEGDKVPSFCLPGIDEEVNEREICIDEFKGKKVILYFYPKDNTPGCTQEACDFRDNLNLLKEMGYVVIGVSPDSTASH
KKFKEKYGLNFILLSDKDKKVAEMFGVYGEKKAYGKVTKGIIRSTFLIDEEGRIIKEWRNVKAKGHVAKVIETLKSLEEK
Q
>Mature_161_residues
MLKEGDKVPSFCLPGIDEEVNEREICIDEFKGKKVILYFYPKDNTPGCTQEACDFRDNLNLLKEMGYVVIGVSPDSTASH
KKFKEKYGLNFILLSDKDKKVAEMFGVYGEKKAYGKVTKGIIRSTFLIDEEGRIIKEWRNVKAKGHVAKVIETLKSLEEK
Q

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=154, Percent_Identity=45.4545454545455, Blast_Score=133, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6322180, Length=127, Percent_Identity=37.7952755905512, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 18360; Mature: 18360

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEGDKVPSFCLPGIDEEVNEREICIDEFKGKKVILYFYPKDNTPGCTQEACDFRDNLN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
LLKEMGYVVIGVSPDSTASHKKFKEKYGLNFILLSDKDKKVAEMFGVYGEKKAYGKVTKG
HHHHCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHH
IIRSTFLIDEEGRIIKEWRNVKAKGHVAKVIETLKSLEEKQ
HHHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKEGDKVPSFCLPGIDEEVNEREICIDEFKGKKVILYFYPKDNTPGCTQEACDFRDNLN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
LLKEMGYVVIGVSPDSTASHKKFKEKYGLNFILLSDKDKKVAEMFGVYGEKKAYGKVTKG
HHHHCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHH
IIRSTFLIDEEGRIIKEWRNVKAKGHVAKVIETLKSLEEKQ
HHHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]