| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15605913
Identifier: 15605913
GI number: 15605913
Start: 283036
End: 284355
Strand: Direct
Name: 15605913
Synonym: aq_414
Alternate gene names: NA
Gene position: 283036-284355 (Clockwise)
Preceding gene: 15605912
Following gene: 15605914
Centisome position: 18.24
GC content: 44.02
Gene sequence:
>1320_bases ATGAGCGTGGTGATAATAGGTGTCGGGCGTTACGCAAGGGAAGTTCTGGAGATAGTAACCGCTATAACAGAAGTCTACGT TATAGAAAAGCCCGGAGAACACATACAGAAGTTTGTGGAAGAAGCTAAAGGGCTGGAGAAAGTGAAGTTCGTTTTTGAAA GTGCCACGGACGTGGAAACTTGGAGGGAGAAGGTAAACCTCTCCGAGGTAGAAGCGGTAATATCCTTCCTTAAGTTAGAA AGCACGCTGGAGGTGGCAAAGCTCCTTAGGGAATTTTTCAATTACGAGGGAGAGATAATTTACGTTGCGAACGAAAGACC AGAAAACGAAGAACTCCAGAAGCTCAAAGTGGACACGGTTTCCATTCCAAACGTACTCAGGGTAATCTTCAAAAACCTCC TGATCGGCAAAGGAATAATAAGGTATCCCGTGGGTATAGGTCTAGAAAAGGGTGAGATAGTGGAAATTACACTTACGGAG TACTCACCTCTCGTTTACAAAAGACTCAGGGATATTAAGATAAGGAAGGCAAGGGTAGCCCTCGTGTATAGGAACGGAAA GCTTTTACTTCCAAGGAGTAACTTAAGGCTCCAGAGCGGAGACAGGCTTCTGGTAGTCGGAGAACCTTCCTCTGTAAACG TATTTATACACACTGCAACGGAAGGAATTTCGGACTTTCCCCTGAACTGGGGAAGTGCAGGCGTTTACTGTTCGGGAAAC GAGAAAGAATTCAATTACCTGAAAGAGAAAGTTAAAGTAAGGGAATGGTTAGAGGATTGTGAAAAAATACAGGAGATTGA GAACTTGGGGCTTATAGTTCTTGAAAAGAAGGAAAGCGGTTTTCTTAAAAAGGGAAGCGTTGACAGGGCTTTTGAAGAGT TTTCTGTTCCTTCCTTTCACCTGAAGGGTACTTACCCTTACGAGAAGGTTCTCGCTTCCGCGAACACAGATGCGAGGGAA GTCTTGCTCTCCACTGCGGTTGATATAGCTGTTCAGTTCGGTTCAAAGCTGTTCATACTCTACGTAAAGCCCTTTGAAAA GATGATTTCCGAAAAGGAAAAGGAGGTAATAGAAGGGCTAAAGAGCTTCGCAGAAAGGGTTAGAAAGATAACGAAGATAA ACCTGGAACTCGTGATAAGGGAAGGAAATCCCGTAAGGGAAACCTTAAAGTTCATGGATGAAGAAAGCTTTAATCTCCTC CTAATAGGATACAAGGTGGGAAGAACTACGAAATTATTCTCACCTTACTCACCTCACCTCATAGCGAGAAAGAGTAAACT CAGTACTCTCCTTGTGCCGGAGGTTGTCCTTGAGCAGTGA
Upstream 100 bases:
>100_bases ATATAATTTCTGAAGGGAAGGTTCTGGCTCACGGGAAACCCGAAGAGGTTGTGAACAACGAAGCTGTAAGGAAGACATAC CTGGGGGTGGATTTCAAATT
Downstream 100 bases:
>100_bases ACTCTTCCTCATAATCGTATTCCTTTCCGCCTTCCTTGCACCACTTTTTTCAAGAATCCTTAGAATGCCCGTACCCGTAG GTGAACTCATTTTCGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: TrkA-C Domain Protein; Potassium Uptake Protein TrkA; TrkA-N Domain Family Protein
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVETWREKVNLSEVEAVISFLKLE STLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTVSIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTE YSPLVYKRLRDIKIRKARVALVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFHLKGTYPYEKVLASANTDARE VLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGLKSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLL LIGYKVGRTTKLFSPYSPHLIARKSKLSTLLVPEVVLEQ
Sequences:
>Translated_439_residues MSVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVETWREKVNLSEVEAVISFLKLE STLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTVSIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTE YSPLVYKRLRDIKIRKARVALVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFHLKGTYPYEKVLASANTDARE VLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGLKSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLL LIGYKVGRTTKLFSPYSPHLIARKSKLSTLLVPEVVLEQ >Mature_438_residues SVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVETWREKVNLSEVEAVISFLKLES TLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTVSIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTEY SPLVYKRLRDIKIRKARVALVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGNE KEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFHLKGTYPYEKVLASANTDAREV LLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGLKSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLLL IGYKVGRTTKLFSPYSPHLIARKSKLSTLLVPEVVLEQ
Specific function: Unknown
COG id: COG3400
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50041; Mature: 49910
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVET CEEEEEECCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCHHH WREKVNLSEVEAVISFLKLESTLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEECCCC SIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTEYSPLVYKRLRDIKIRKARVA CCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCEEEEEEEE LVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN EEEECCEEEEECCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEECCC EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFH CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEE LKGTYPYEKVLASANTDAREVLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGL ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH KSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLLLIGYKVGRTTKLFSPYSPHL HHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCCC IARKSKLSTLLVPEVVLEQ EEEHHHHHHHCCCHHHHCC >Mature Secondary Structure SVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVET EEEEEECCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCHHH WREKVNLSEVEAVISFLKLESTLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEECCCC SIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTEYSPLVYKRLRDIKIRKARVA CCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCEEEEEEEE LVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN EEEECCEEEEECCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEECCC EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFH CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEE LKGTYPYEKVLASANTDAREVLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGL ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH KSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLLLIGYKVGRTTKLFSPYSPHL HHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCCC IARKSKLSTLLVPEVVLEQ EEEHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA