Click here to switch to the map view.

The map label for this gene is 15605904

Identifier: 15605904

GI number: 15605904

Start: 273087

End: 274112

Strand: Direct

Name: 15605904

Synonym: aq_403

Alternate gene names: NA

Gene position: 273087-274112 (Clockwise)

Preceding gene: 15605903

Following gene: 15605905

Centisome position: 17.6

GC content: 43.66

Gene sequence:

>1026_bases
ATGAATGTATTCGGTGTAATACAGGAGCTTGACGTAGAACTTAATGAAAAATTAGTGGAAAAATTAATAGAAGGTTTTGA
AATAAGAAAAAAGAATTTTGGAGATAAGGTATTCTTCTACTCCCCGGGTTTCAAACATTACGAAGTTGAAGACTTTTCAG
TAAACTCCCCTCCCAAGTTCGTTGACATATCCGTTACGGGGAGAAATTGTGAACTTATGTGTGATCACTGTGCTTCTAAA
ATCCTGTGGCACATGATACCCGCAACGACTCCAGAAGAACTCGTGAAAGTTGGGGAAGATTTAAAGAAAAAGGGAATAGA
AGGAGTTCTGATTTCAGGCGGTTCGGACAAAAACGGATTCGTTCCTCTCTGGGACTTCTTTGACGCTATGAAGTATTTGA
AAGAAGAACTTGGTTTTCTCCTTACCTGCCACGTTGGACTCGTTGATGAAGATTACGTGGAAAAATTAAAGGAAGCGAAC
GTGGACGCTGTACTCCTTGACATTATCGGAGACAACGAAACTATAGCACAGGTCTACAAGCTTCCTCACAAAAGTGTTGA
AGATTACGACCGCTCCCTTAGACTTCTGAAAGAAGCGGGACTCAGAATAGTTCCTCACGTGATTATCGGACTTCACTACG
GAAAGATAAAGGGTGAATATAACGCCATAGATATGATCGCAAAGTATGAACCTGATGCCTTGGTACTAGTTGTGGTCATG
CCCTACTACGGAAAGGCTAAGTTCCAGCTCCTTCCACCGCCTTCCAGTGAGGAAAGTGCACAAGTAATTCTCTACGCAAG
AAAAGCCGTTCCGAATTCACCCGTGGTTATAGGCTGTGCAAGACCGGCGGGTGCGGACAGGGTAAAGCTGGACGCTTACT
CGGTTTTAGCCGGTGTAAACGGTATAGCCTTCCCGGCTGAAGGAATAGTTACTTACTCAAAATCCCTCGGACTCGAACCT
GTGGTATCACCCAACTGTTGTTCTACAGTGTACTCCATGGTTTTCCAAACTATGGAAACTCAGTGA

Upstream 100 bases:

>100_bases
CAAAGCGGCTGAACTTCTCCAACCAATAGTTCAAGAAAAAGGAGTTAAGTGCGGTTAATTCCCCTTCTCTCTCCTTTTAA
AACCTTTTGAGGGAGCGGTA

Downstream 100 bases:

>100_bases
TAAACTTATTCTGGTTATGAAATTAGGAGTTCTCGGTTCTACGGGTTCTGTTGGCTCTCAAACTCTTCAGGTTTACGAGA
ATTTCAGGGATGAAATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Biotin Synthase; Biotin Synthase-Related Protein; Radical SAM Superfamily Protein; Biotin Synthase-Related Protein Radical SAM Superfamily; Biotin Synthetase-Like Protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNVFGVIQELDVELNEKLVEKLIEGFEIRKKNFGDKVFFYSPGFKHYEVEDFSVNSPPKFVDISVTGRNCELMCDHCASK
ILWHMIPATTPEELVKVGEDLKKKGIEGVLISGGSDKNGFVPLWDFFDAMKYLKEELGFLLTCHVGLVDEDYVEKLKEAN
VDAVLLDIIGDNETIAQVYKLPHKSVEDYDRSLRLLKEAGLRIVPHVIIGLHYGKIKGEYNAIDMIAKYEPDALVLVVVM
PYYGKAKFQLLPPPSSEESAQVILYARKAVPNSPVVIGCARPAGADRVKLDAYSVLAGVNGIAFPAEGIVTYSKSLGLEP
VVSPNCCSTVYSMVFQTMETQ

Sequences:

>Translated_341_residues
MNVFGVIQELDVELNEKLVEKLIEGFEIRKKNFGDKVFFYSPGFKHYEVEDFSVNSPPKFVDISVTGRNCELMCDHCASK
ILWHMIPATTPEELVKVGEDLKKKGIEGVLISGGSDKNGFVPLWDFFDAMKYLKEELGFLLTCHVGLVDEDYVEKLKEAN
VDAVLLDIIGDNETIAQVYKLPHKSVEDYDRSLRLLKEAGLRIVPHVIIGLHYGKIKGEYNAIDMIAKYEPDALVLVVVM
PYYGKAKFQLLPPPSSEESAQVILYARKAVPNSPVVIGCARPAGADRVKLDAYSVLAGVNGIAFPAEGIVTYSKSLGLEP
VVSPNCCSTVYSMVFQTMETQ
>Mature_341_residues
MNVFGVIQELDVELNEKLVEKLIEGFEIRKKNFGDKVFFYSPGFKHYEVEDFSVNSPPKFVDISVTGRNCELMCDHCASK
ILWHMIPATTPEELVKVGEDLKKKGIEGVLISGGSDKNGFVPLWDFFDAMKYLKEELGFLLTCHVGLVDEDYVEKLKEAN
VDAVLLDIIGDNETIAQVYKLPHKSVEDYDRSLRLLKEAGLRIVPHVIIGLHYGKIKGEYNAIDMIAKYEPDALVLVVVM
PYYGKAKFQLLPPPSSEESAQVILYARKAVPNSPVVIGCARPAGADRVKLDAYSVLAGVNGIAFPAEGIVTYSKSLGLEP
VVSPNCCSTVYSMVFQTMETQ

Specific function: Unknown

COG id: COG1856

COG function: function code S; Uncharacterized homolog of biotin synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37877; Mature: 37877

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFGVIQELDVELNEKLVEKLIEGFEIRKKNFGDKVFFYSPGFKHYEVEDFSVNSPPKF
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCE
VDISVTGRNCELMCDHCASKILWHMIPATTPEELVKVGEDLKKKGIEGVLISGGSDKNGF
EEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
VPLWDFFDAMKYLKEELGFLLTCHVGLVDEDYVEKLKEANVDAVLLDIIGDNETIAQVYK
CHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
LPHKSVEDYDRSLRLLKEAGLRIVPHVIIGLHYGKIKGEYNAIDMIAKYEPDALVLVVVM
CCCCCHHHHHHHHHHHHHCCCEEECHHHHEEEEEEECCCCCCEEEEEECCCCEEEEEEEE
PYYGKAKFQLLPPPSSEESAQVILYARKAVPNSPVVIGCARPAGADRVKLDAYSVLAGVN
CCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEHHHHHHHCCC
GIAFPAEGIVTYSKSLGLEPVVSPNCCSTVYSMVFQTMETQ
CCCCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVFGVIQELDVELNEKLVEKLIEGFEIRKKNFGDKVFFYSPGFKHYEVEDFSVNSPPKF
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCE
VDISVTGRNCELMCDHCASKILWHMIPATTPEELVKVGEDLKKKGIEGVLISGGSDKNGF
EEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
VPLWDFFDAMKYLKEELGFLLTCHVGLVDEDYVEKLKEANVDAVLLDIIGDNETIAQVYK
CHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
LPHKSVEDYDRSLRLLKEAGLRIVPHVIIGLHYGKIKGEYNAIDMIAKYEPDALVLVVVM
CCCCCHHHHHHHHHHHHHCCCEEECHHHHEEEEEEECCCCCCEEEEEECCCCEEEEEEEE
PYYGKAKFQLLPPPSSEESAQVILYARKAVPNSPVVIGCARPAGADRVKLDAYSVLAGVN
CCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEHHHHHHHCCC
GIAFPAEGIVTYSKSLGLEPVVSPNCCSTVYSMVFQTMETQ
CCCCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA