| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is lon
Identifier: 15605788
GI number: 15605788
Start: 151206
End: 153593
Strand: Direct
Name: lon
Synonym: aq_242
Alternate gene names: 15605788
Gene position: 151206-153593 (Clockwise)
Preceding gene: 15605786
Following gene: 15605791
Centisome position: 9.75
GC content: 47.45
Gene sequence:
>2388_bases GTGAACGAACTATTTCAAACCCCTCAGGTAGAAGCGGGAATTAAAGAATACCCCTTAATGCCTTTAAGGGACATAGTTAT CTTCCCCACAATGGTTCAGCCTCTCTTTGTAGGAAGGCGTTTCTCAATAAGAGCTATTGAGGAGGCGAACAAAAAGGACA AACTTATATTCTTAGTTCTTCAAAAGGACAAAGATGTAGAAGAACCTAAGGAAGAGGACATATACAAAGTCGGTGTGGTT GCCTACATATTAAGAACAGTTCCCATAGAGGACGCAAGAGTAAAGGTTCTCGTTCAGGGATTAAAGAGAGGGGTTATAAA GAAGCTCGAGTGGAAAGAAGACCACTACGTAGCCCAGGTAGACGTTATAGAGGAAAGGGACATCCCGCCCGAAAGCCAAA CGATAGAGGACAAAGCCCTCATAAAGGCCGTAAAGGAATCCATAGACAAACTCGTCAGCCTTGGAAAACAGATAATTCCC GACCTCGTAGTTCTCATAAAGGAACTCGAAGAACCCGGAAAGCTCGCGGATATGGTAGCCTCCATCCTTGATATAAAATC CTCACAGGCTCAGGAGATACTGGAAACTTTCGACCCCAGAGAAAGACTTAAGAAGGTTTACAAATTCCTACAGGACGAAA TAGGACTCCTAGAAGTAAAACAAAGGATAAGCGAGATAGCAAGGGAGAGAATGGAAAAGGAACAGAGGGAGTACTACCTC AGACAGCAACTCAAAGCCATACAGGAGGAACTCGGAGAAGCAGGCGGAATAAAGGCTGAAATAGAGGAGTACACAAAGAA GTTTGAAGAAGTCAAAGAGTGTATGCCTGAAGAAGGGGTAAAGGAAGTAGAAAAGAACATAAAGAGACTAGAGAGACTGC ACCCCGAGTCCGCGGAAGCTGGAGTTATAAGAACGTGGCTCGACTGGGTTCTGGACCTTCCCTGGTGTACGAGGACTGAG GACAATTACGACCTTGAAAGGGCAAGGGAAATTTTAGACAGAGATCACTACGACCTTGAAAAGGTAAAGGACAGGATAAT AGAGTACCTCGCCATAAGGAAGTTAACTCAAGGTAAAGAAGCCCCAACTCAGATACTTGCCTTTGTAGGACCTCCGGGTG TAGGTAAGACTTCCCTAGGACGCTCAATAGCGGAGGCCCTCGGAAGGAAGTTCGTAAGGATAGCTTTGGGAGGTATAAGG GACGAGGCGGAAATCAGGGGACACAGGAGAACTTACGTCGGGGCAATGCCCGGAAGGATTATTCAAGCCATAAAACAGGC CGGAACGAAAAACCCTGTAATAATGCTGGATGAGATAGACAAGCTCGCCATATCCTTCCAGGGAGACCCCGCGGCTGCAC TCCTCGAAGTCCTTGATCCGGAGCAAAATAAGAAGTTCACGGACCTCTACATAGGGATTCCCTTTGACCTCTCAGAAGTG ATATTCATTTGTACGGGAAACAGGGCGGATACTATTCCCACACCGCTCCTCGACAGGATGGAACTCATAATGCTTTCAGG ATACTCCGAAGAGGAGAAACTCTTCATAGCAAAGAAACACTTGATTCCCAAGTTAATTCCCCTCCACGGCTTTAGCCCGG AAGAGATCGAGTTTACGGACGAGGCTATTCTGGAGATAATAAGGGGCTACACGAGAGAGGCGGGAGTGAGAAACCTTCAA AGGCAGATTTCCGCAGTCCTGAGAAAAATAGCTGTAAAGAAACTACAGGGTGAGAAAGGTCCGTTTAATATAACCCCTGA GCTCGTCAGAAAACTCCTCGGAGTTCCGAGGTACAGACCTGAAAGGGAAAAGAAACCTCTCGTTGGGGTTGCCACAGGAC TCGCATGGACCGAAGTAGGCGGAGAGATAATGTTCATAGAAGCCACGAAGATGAAGGGGAAAGGCTCGCTTGTTCTCACA GGTTCACTGGGAGACATAATGAAAGAAAGTGCTCAGGCAGCTCTCTCTTACATCCGCTCAAAGGCGGAAGACTACGGCAT AGATCCGGATATATTCTCACAGGTTGACGTTCACGTGCACGTTCCCGAGGGAGCGGTTCCGAAGGACGGACCATCCGCGG GTGTTGCGATAGCGACCGCACTCCTATCTCTGTTTACGGACATTCCCGTGAGGATGGACGTTGCCATGACGGGAGAAATT ACCTTAAGGGGAAGAGTGCTCCCCGTAGGTGGTCTGAAGGAAAAGATACTCGCGGCAAAGAGAGCGGAAATCTACGAGGT AATCCTGCCCGCTAAAAACAAAGACGAGGTTATGGAAGAACTCCCAGAGTACGTAAGGGAAAAGATGACTCTACACTTTG TAGATAACTTAGAAGAAGTGTTCAAGATAGCATTAGTGAGAGAGCCAAAGCCCCTCAAAGAGGCGTGA
Upstream 100 bases:
>100_bases TTTTTTATAACTTCTTCCTTCCCCTTTATTACTTTCGAGACCTCAGAAATTATGAGGTTTATGTCCATTGGTATAATTTT AAAAACAAGGAGGAGAAAAG
Downstream 100 bases:
>100_bases TCTCTATAAGGTAAACCTCTCCCCTGTTCTGTATGGGGATCGTTCCCTTGCTCCCCGTTATTACAAATATCCTTCCTTCG CTATCCCTTACTATAGCCTG
Product: Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MNELFQTPQVEAGIKEYPLMPLRDIVIFPTMVQPLFVGRRFSIRAIEEANKKDKLIFLVLQKDKDVEEPKEEDIYKVGVV AYILRTVPIEDARVKVLVQGLKRGVIKKLEWKEDHYVAQVDVIEERDIPPESQTIEDKALIKAVKESIDKLVSLGKQIIP DLVVLIKELEEPGKLADMVASILDIKSSQAQEILETFDPRERLKKVYKFLQDEIGLLEVKQRISEIARERMEKEQREYYL RQQLKAIQEELGEAGGIKAEIEEYTKKFEEVKECMPEEGVKEVEKNIKRLERLHPESAEAGVIRTWLDWVLDLPWCTRTE DNYDLERAREILDRDHYDLEKVKDRIIEYLAIRKLTQGKEAPTQILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIR DEAEIRGHRRTYVGAMPGRIIQAIKQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEV IFICTGNRADTIPTPLLDRMELIMLSGYSEEEKLFIAKKHLIPKLIPLHGFSPEEIEFTDEAILEIIRGYTREAGVRNLQ RQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGVPRYRPEREKKPLVGVATGLAWTEVGGEIMFIEATKMKGKGSLVLT GSLGDIMKESAQAALSYIRSKAEDYGIDPDIFSQVDVHVHVPEGAVPKDGPSAGVAIATALLSLFTDIPVRMDVAMTGEI TLRGRVLPVGGLKEKILAAKRAEIYEVILPAKNKDEVMEELPEYVREKMTLHFVDNLEEVFKIALVREPKPLKEA
Sequences:
>Translated_795_residues MNELFQTPQVEAGIKEYPLMPLRDIVIFPTMVQPLFVGRRFSIRAIEEANKKDKLIFLVLQKDKDVEEPKEEDIYKVGVV AYILRTVPIEDARVKVLVQGLKRGVIKKLEWKEDHYVAQVDVIEERDIPPESQTIEDKALIKAVKESIDKLVSLGKQIIP DLVVLIKELEEPGKLADMVASILDIKSSQAQEILETFDPRERLKKVYKFLQDEIGLLEVKQRISEIARERMEKEQREYYL RQQLKAIQEELGEAGGIKAEIEEYTKKFEEVKECMPEEGVKEVEKNIKRLERLHPESAEAGVIRTWLDWVLDLPWCTRTE DNYDLERAREILDRDHYDLEKVKDRIIEYLAIRKLTQGKEAPTQILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIR DEAEIRGHRRTYVGAMPGRIIQAIKQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEV IFICTGNRADTIPTPLLDRMELIMLSGYSEEEKLFIAKKHLIPKLIPLHGFSPEEIEFTDEAILEIIRGYTREAGVRNLQ RQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGVPRYRPEREKKPLVGVATGLAWTEVGGEIMFIEATKMKGKGSLVLT GSLGDIMKESAQAALSYIRSKAEDYGIDPDIFSQVDVHVHVPEGAVPKDGPSAGVAIATALLSLFTDIPVRMDVAMTGEI TLRGRVLPVGGLKEKILAAKRAEIYEVILPAKNKDEVMEELPEYVREKMTLHFVDNLEEVFKIALVREPKPLKEA >Mature_795_residues MNELFQTPQVEAGIKEYPLMPLRDIVIFPTMVQPLFVGRRFSIRAIEEANKKDKLIFLVLQKDKDVEEPKEEDIYKVGVV AYILRTVPIEDARVKVLVQGLKRGVIKKLEWKEDHYVAQVDVIEERDIPPESQTIEDKALIKAVKESIDKLVSLGKQIIP DLVVLIKELEEPGKLADMVASILDIKSSQAQEILETFDPRERLKKVYKFLQDEIGLLEVKQRISEIARERMEKEQREYYL RQQLKAIQEELGEAGGIKAEIEEYTKKFEEVKECMPEEGVKEVEKNIKRLERLHPESAEAGVIRTWLDWVLDLPWCTRTE DNYDLERAREILDRDHYDLEKVKDRIIEYLAIRKLTQGKEAPTQILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIR DEAEIRGHRRTYVGAMPGRIIQAIKQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEV IFICTGNRADTIPTPLLDRMELIMLSGYSEEEKLFIAKKHLIPKLIPLHGFSPEEIEFTDEAILEIIRGYTREAGVRNLQ RQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGVPRYRPEREKKPLVGVATGLAWTEVGGEIMFIEATKMKGKGSLVLT GSLGDIMKESAQAALSYIRSKAEDYGIDPDIFSQVDVHVHVPEGAVPKDGPSAGVAIATALLSLFTDIPVRMDVAMTGEI TLRGRVLPVGGLKEKILAAKRAEIYEVILPAKNKDEVMEELPEYVREKMTLHFVDNLEEVFKIALVREPKPLKEA
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI21396489, Length=670, Percent_Identity=43.5820895522388, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI31377667, Length=661, Percent_Identity=44.3267776096823, Blast_Score=531, Evalue=1e-150, Organism=Escherichia coli, GI1786643, Length=783, Percent_Identity=49.1698595146871, Blast_Score=734, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=707, Percent_Identity=38.7553041018388, Blast_Score=471, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17556486, Length=550, Percent_Identity=42.1818181818182, Blast_Score=451, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6319449, Length=748, Percent_Identity=38.5026737967914, Blast_Score=493, Evalue=1e-140, Organism=Drosophila melanogaster, GI221513036, Length=686, Percent_Identity=42.2740524781341, Blast_Score=531, Evalue=1e-151, Organism=Drosophila melanogaster, GI24666867, Length=680, Percent_Identity=42.5, Blast_Score=530, Evalue=1e-150,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON_AQUAE (O66605)
Other databases:
- EMBL: AE000657 - PIR: A70322 - RefSeq: NP_213165.1 - ProteinModelPortal: O66605 - MEROPS: S16.001 - GeneID: 1192839 - GenomeReviews: AE000657_GR - KEGG: aae:aq_242 - NMPDR: fig|224324.1.peg.180 - HOGENOM: HBG566281 - OMA: KDAGTIN - PhylomeDB: O66605 - ProtClustDB: CLSK2299336 - BioCyc: AAEO224324:AQ_242-MONOMER - BRENDA: 3.4.21.53 - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 89973; Mature: 89973
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 692-692 ACT_SITE 735-735
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELFQTPQVEAGIKEYPLMPLRDIVIFPTMVQPLFVGRRFSIRAIEEANKKDKLIFLVL CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCEEEEEE QKDKDVEEPKEEDIYKVGVVAYILRTVPIEDARVKVLVQGLKRGVIKKLEWKEDHYVAQV ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE DVIEERDIPPESQTIEDKALIKAVKESIDKLVSLGKQIIPDLVVLIKELEEPGKLADMVA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SILDIKSSQAQEILETFDPRERLKKVYKFLQDEIGLLEVKQRISEIARERMEKEQREYYL HHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQQLKAIQEELGEAGGIKAEIEEYTKKFEEVKECMPEEGVKEVEKNIKRLERLHPESAEA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC GVIRTWLDWVLDLPWCTRTEDNYDLERAREILDRDHYDLEKVKDRIIEYLAIRKLTQGKE HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC APTQILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIRDEAEIRGHRRTYVGAMPGRI CHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHEECCCCHHH IQAIKQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEV HHHHHHCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCE IFICTGNRADTIPTPLLDRMELIMLSGYSEEEKLFIAKKHLIPKLIPLHGFSPEEIEFTD EEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCH EAILEIIRGYTREAGVRNLQRQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGVPRYRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC EREKKPLVGVATGLAWTEVGGEIMFIEATKMKGKGSLVLTGSLGDIMKESAQAALSYIRS CCCCCCCEEHHHCCHHHHCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHH KAEDYGIDPDIFSQVDVHVHVPEGAVPKDGPSAGVAIATALLSLFTDIPVRMDVAMTGEI HHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECEE TLRGRVLPVGGLKEKILAAKRAEIYEVILPAKNKDEVMEELPEYVREKMTLHFVDNLEEV EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FKIALVREPKPLKEA HHHHHHCCCCCCCCC >Mature Secondary Structure MNELFQTPQVEAGIKEYPLMPLRDIVIFPTMVQPLFVGRRFSIRAIEEANKKDKLIFLVL CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCEEEEEE QKDKDVEEPKEEDIYKVGVVAYILRTVPIEDARVKVLVQGLKRGVIKKLEWKEDHYVAQV ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE DVIEERDIPPESQTIEDKALIKAVKESIDKLVSLGKQIIPDLVVLIKELEEPGKLADMVA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SILDIKSSQAQEILETFDPRERLKKVYKFLQDEIGLLEVKQRISEIARERMEKEQREYYL HHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQQLKAIQEELGEAGGIKAEIEEYTKKFEEVKECMPEEGVKEVEKNIKRLERLHPESAEA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC GVIRTWLDWVLDLPWCTRTEDNYDLERAREILDRDHYDLEKVKDRIIEYLAIRKLTQGKE HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC APTQILAFVGPPGVGKTSLGRSIAEALGRKFVRIALGGIRDEAEIRGHRRTYVGAMPGRI CHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHEECCCCHHH IQAIKQAGTKNPVIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEV HHHHHHCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCE IFICTGNRADTIPTPLLDRMELIMLSGYSEEEKLFIAKKHLIPKLIPLHGFSPEEIEFTD EEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCH EAILEIIRGYTREAGVRNLQRQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGVPRYRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC EREKKPLVGVATGLAWTEVGGEIMFIEATKMKGKGSLVLTGSLGDIMKESAQAALSYIRS CCCCCCCEEHHHCCHHHHCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHH KAEDYGIDPDIFSQVDVHVHVPEGAVPKDGPSAGVAIATALLSLFTDIPVRMDVAMTGEI HHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECEE TLRGRVLPVGGLKEKILAAKRAEIYEVILPAKNKDEVMEELPEYVREKMTLHFVDNLEEV EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FKIALVREPKPLKEA HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320