| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is purK
Identifier: 15605791
GI number: 15605791
Start: 156794
End: 157891
Strand: Direct
Name: purK
Synonym: aq_245
Alternate gene names: 15605791
Gene position: 156794-157891 (Clockwise)
Preceding gene: 15605788
Following gene: 15605798
Centisome position: 10.11
GC content: 41.53
Gene sequence:
>1098_bases ATGCTTACCGTGGGTATCCTCGGAGGTGGACAGCTCGGATGGATGACTATACTGGAAGGGAGAAAACTCGGGTTTAAATT TCACGTCCTTGAAGACAAAGAAAACGCTCCTGCCTGCAGGGTTGCTGACAGGTGTTTCAGAACAGGACAAATAAGTGAAT TCGTAGACTCCTGTGACATTATTACTTACGAATTTGAACACATTAAAGATGAAGTTTTGGAAAAGTGCGAGAGTAAATTA ATTCCCAACCCTCAAGCTCTTTACGTTAAAAAAAGCAGAATCAGGGAAAAGCTTTTTCTGAAAAAGCACGGTTTTCCCGT GCCGGAGTTTTTAGTAATCAAAAGGGACGAGATAATAGATGCTTTAAAGAGTTTTAAACTTCCTGTGGTGATAAAGGCGG AAAAGCTTGGCTACGACGGAAAAGGACAGTACAGGATAAAAAAACTCGAGGATGCAAACCAGGTTGTCAAAAACCACGAC AAAGAAGAAAGTTTCATAATTGAGGAATTCGTAAAGTTTGAAGCGGAAATTTCCTGTATAGGTGTAAGGGACAGGGAAGG TAAAACGTACTTTTACCCTCAGCCATTCAATAAACACGAAGAGGGTATACTTATTTACAACTACGTGCCCTATGCAAAGT TAAAAGAAGCTGAAGAAATAACTAAGAGGCTAATGGAGCTTTTAGATATAGTGGGTGTGTTCACGGTTGAATTTTTCCTG CTAAAAGACGGGAGAGTTTTAATAAACGAATTTGCTCCGAGGGTTCACAACACGGGACACTGGACCTTGGATGGAGCGTA CACCTCCCAGTTTGAAAACCTCCTTAGGGCTATAACGGAAATGCCTCTTGGTTCTACGGAGTTAAAACTACCGAGCGGTA TGGTGAATATACTCGGGAAATCTTATGAGGAAATCCCTCTGAAAGAAATCCTTTCCGTTGAAGGTGCAAAACTATACTGG TATGGCAAAGAGAAGAAACCAAGAAGGAAGGTAGGACACGTTAACGTGGTGGGAAGGTCAAAGGAAGAAGTAGTTGAAAA AGTAGAAAGAGTCTTCACACTTCTCAAAGGCTCAAGAGAAAAACTCCCAGCACCATGA
Upstream 100 bases:
>100_bases TTGAAACTTCGGTGATAAAGGAGCATTTTTCACAAAAGAAATCAGTTTCTAATGTACCGTGTGGATAAAAATGATTATTT GTGTTTAAAATTCTTTAGAA
Downstream 100 bases:
>100_bases TTATACTCGCCTTAAAAGCGTTCTTAACTTTTTCGCCGAAGAAGACCTTTCCGTAAAGGACGTCAAGGAGTATGGCCAGC CTTTCGGTGGCGGCAACAAA
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDIITYEFEHIKDEVLEKCESKL IPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIKRDEIIDALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHD KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLMELLDIVGVFTVEFFL LKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMPLGSTELKLPSGMVNILGKSYEEIPLKEILSVEGAKLYW YGKEKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLKGSREKLPAP
Sequences:
>Translated_365_residues MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDIITYEFEHIKDEVLEKCESKL IPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIKRDEIIDALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHD KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLMELLDIVGVFTVEFFL LKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMPLGSTELKLPSGMVNILGKSYEEIPLKEILSVEGAKLYW YGKEKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLKGSREKLPAP >Mature_365_residues MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDIITYEFEHIKDEVLEKCESKL IPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIKRDEIIDALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHD KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLMELLDIVGVFTVEFFL LKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMPLGSTELKLPSGMVNILGKSYEEIPLKEILSVEGAKLYW YGKEKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLKGSREKLPAP
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain
Homologues:
Organism=Escherichia coli, GI1786733, Length=363, Percent_Identity=33.6088154269972, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1788155, Length=377, Percent_Identity=25.4641909814324, Blast_Score=83, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324702, Length=381, Percent_Identity=30.1837270341207, Blast_Score=182, Evalue=9e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURK_AQUAE (O66608)
Other databases:
- EMBL: AE000657 - PIR: D70322 - RefSeq: NP_213168.1 - PDB: 2Z04 - PDBsum: 2Z04 - ProteinModelPortal: O66608 - SMR: O66608 - GeneID: 1192842 - GenomeReviews: AE000657_GR - KEGG: aae:aq_245 - NMPDR: fig|224324.1.peg.183 - HOGENOM: HBG516369 - OMA: LAVEMFV - PhylomeDB: O66608 - ProtClustDB: PRK06019 - BioCyc: AAEO224324:AQ_245-MONOMER - BRENDA: 4.1.1.21 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - Gene3D: G3DSA:3.30.470.20 - Gene3D: G3DSA:3.40.50.20 - PANTHER: PTHR23047:SF1 - TIGRFAMs: TIGR01161
Pfam domain/function: PF02222 ATP-grasp; SSF52440 PreATP-grasp-like; SSF51246 Rudmnt_hyb_motif
EC number: =6.3.4.18
Molecular weight: Translated: 41988; Mature: 41988
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50975 ATP_GRASP
Important sites: BINDING 93-93 BINDING 132-132 BINDING 143-143 BINDING 176-176
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDI CEEEEEECCCCCCHHEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCE ITYEFEHIKDEVLEKCESKLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIKRDEIID EEEHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH ALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHDKEESFIIEEFVKFEAEISCI HHHHCCCCEEEEHHHCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEE GVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLMELLDIVGVFTVEFFL EEECCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMPLGSTELKLPSGMVNILGK ECCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHCC SYEEIPLKEILSVEGAKLYWYGKEKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLKGSRE CCCCCCHHHHHCCCCCEEEEECCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCC KLPAP CCCCC >Mature Secondary Structure MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDI CEEEEEECCCCCCHHEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCE ITYEFEHIKDEVLEKCESKLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIKRDEIID EEEHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH ALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHDKEESFIIEEFVKFEAEISCI HHHHCCCCEEEEHHHCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEE GVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLMELLDIVGVFTVEFFL EEECCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMPLGSTELKLPSGMVNILGK ECCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHCC SYEEIPLKEILSVEGAKLYWYGKEKKPRRKVGHVNVVGRSKEEVVEKVERVFTLLKGSRE CCCCCCHHHHHCCCCCEEEEECCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCC KLPAP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320