Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15605728

Identifier: 15605728

GI number: 15605728

Start: 94648

End: 95808

Strand: Direct

Name: 15605728

Synonym: aq_155

Alternate gene names: NA

Gene position: 94648-95808 (Clockwise)

Preceding gene: 15605727

Following gene: 15605729

Centisome position: 6.1

GC content: 43.58

Gene sequence:

>1161_bases
ATGCTCTGGTTTTCCCTCTTTATTTTATCCATAGCAATCGGTGGTTCTTTTGCCCTCCTCGTTGCAATAGCAAGGACTCC
GGGACTTGCGGATCTCTTTCCTCCAAAGTACTTCTACCACGCTCTTGTGGGACACGTGGACAGCGCTCTGATAGTCGGAC
TTTACGCATTTTTGATATTTTTATGGCACAGGATTTTTGAAAAGAAGGAAAACTTCGCAAGCTTCCTTCCCGCACTGCTC
GGGTTTTTTATGATAGCGGGAAGTTCACTCTTTGGTCTCGGACAGGCACTATGGAACAACTACGTTCCTACCATAATACA
CCCTGTATTCTTCGGCGGAGTATCTTTATTTTTCCTTGGTGTTTTCTTAAACTCTTTGAGGTTTTTGCCTCAAGCTGTTA
AGAACTTCTACATCGGTGATACCCTGAAATCCATTCTTTCTACTACCGTGATTAATTCTTTCTTAATGCCCTTAACTTAC
CTCATCGCCTACTTCAACACTCCAAAAGGAGAAAATGTTTACGAGTACTTTGAGGCACTTTTCTGGTTCGGCGGGCATAC
CCACCAGTTTGTAAACGCGGGACTCCTGATTTCATTGTGGCTACTCCTCCTGAGAAGGGAAGTTCTAAACCTCTGGTTTT
TAAACTTACTTCTCGTTGTATTTCCTATAACTTACTTCTTTGCCCAGATTTTCCTGAACCCTCTATCTTCTACAGGAAAG
AGCCTCACCACGTGGGGTTACATGGTCGGTATAGGTATTCCTACAATCGTTTACGGACTCATAACTCTTGTAAGGGCTGT
TAAAGGATTGGACTTTTATAGAAGCATTCTTGTGCTGTCCGTTTCCCTTTATCTCCTTGGGGCTTTAATGGGATACATGA
TAGTAGGTATGGATACGAGGGTTCCAGCACATTACCACACGGTAATAGCGAGTATACTCGTGGGCGTTATAGCTCTTACC
TTTATGTACCTTCAGGAACTGGGATACATGGAAAAACTCGGGAAGTTTGAGAAGTTTATCCCTTTTTCTACGGTTTTGGT
ATGCTTCTTTTTGTCCTCGGACTCTTCTGGGCGGGAGTCTTTGGAGCTCCAAGGAAAACTCCGGGAACGGATTACATACA
AAACGCAAAGGTTTACTTATTCATGGCTCTCATGGGACTAG

Upstream 100 bases:

>100_bases
TTCTTCTCAAAGAAAGAGGAAAGTATGAAACTCTTTTTCTTCTCAATCATTTACCTTGCGGTTCTTTTCGGAACAATGAT
AGTGGACATGGTGAAGTGAT

Downstream 100 bases:

>100_bases
GTTCTGTACTATCCGTAGTAGGAGGGGCTTCTTTCGTCTTTGTAGTGCTGAAAACAGTTTTGAGAGGTAGGAAGTATGGA
AAGGAGACAGAAGCAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLWFSLFILSIAIGGSFALLVAIARTPGLADLFPPKYFYHALVGHVDSALIVGLYAFLIFLWHRIFEKKENFASFLPALL
GFFMIAGSSLFGLGQALWNNYVPTIIHPVFFGGVSLFFLGVFLNSLRFLPQAVKNFYIGDTLKSILSTTVINSFLMPLTY
LIAYFNTPKGENVYEYFEALFWFGGHTHQFVNAGLLISLWLLLLRREVLNLWFLNLLLVVFPITYFFAQIFLNPLSSTGK
SLTTWGYMVGIGIPTIVYGLITLVRAVKGLDFYRSILVLSVSLYLLGALMGYMIVGMDTRVPAHYHTVIASILVGVIALT
FMYLQELGYMEKLGKFEKFIPFSTVLVCFFLSSDSSGRESLELQGKLRERITYKTQRFTYSWLSWD

Sequences:

>Translated_386_residues
MLWFSLFILSIAIGGSFALLVAIARTPGLADLFPPKYFYHALVGHVDSALIVGLYAFLIFLWHRIFEKKENFASFLPALL
GFFMIAGSSLFGLGQALWNNYVPTIIHPVFFGGVSLFFLGVFLNSLRFLPQAVKNFYIGDTLKSILSTTVINSFLMPLTY
LIAYFNTPKGENVYEYFEALFWFGGHTHQFVNAGLLISLWLLLLRREVLNLWFLNLLLVVFPITYFFAQIFLNPLSSTGK
SLTTWGYMVGIGIPTIVYGLITLVRAVKGLDFYRSILVLSVSLYLLGALMGYMIVGMDTRVPAHYHTVIASILVGVIALT
FMYLQELGYMEKLGKFEKFIPFSTVLVCFFLSSDSSGRESLELQGKLRERITYKTQRFTYSWLSWD
>Mature_386_residues
MLWFSLFILSIAIGGSFALLVAIARTPGLADLFPPKYFYHALVGHVDSALIVGLYAFLIFLWHRIFEKKENFASFLPALL
GFFMIAGSSLFGLGQALWNNYVPTIIHPVFFGGVSLFFLGVFLNSLRFLPQAVKNFYIGDTLKSILSTTVINSFLMPLTY
LIAYFNTPKGENVYEYFEALFWFGGHTHQFVNAGLLISLWLLLLRREVLNLWFLNLLLVVFPITYFFAQIFLNPLSSTGK
SLTTWGYMVGIGIPTIVYGLITLVRAVKGLDFYRSILVLSVSLYLLGALMGYMIVGMDTRVPAHYHTVIASILVGVIALT
FMYLQELGYMEKLGKFEKFIPFSTVLVCFFLSSDSSGRESLELQGKLRERITYKTQRFTYSWLSWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP382

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y155_AQUAE (O66545)

Other databases:

- EMBL:   AE000657
- PIR:   F70314
- RefSeq:   NP_213105.1
- ProteinModelPortal:   O66545
- GeneID:   1192688
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_155
- NMPDR:   fig|224324.1.peg.120
- OMA:   RERITYK
- BioCyc:   AAEO224324:AQ_155-MONOMER
- InterPro:   IPR000883

Pfam domain/function: SSF81442 COX1

EC number: NA

Molecular weight: Translated: 43794; Mature: 43794

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbc053f4)-; HASH(0xc3f90c4)-; HASH(0xb3075d0)-; HASH(0xbc154bc)-; HASH(0xb2f2e34)-; HASH(0xc0df194)-; HASH(0x40695e44)-; HASH(0xb2ea05c)-; HASH(0xbb08234)-; HASH(0x4069549c)-; HASH(0xba5e210)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHEEHHCCCH
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHEEHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320