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The map label for this gene is yrbG [C]

Identifier: 15605665

GI number: 15605665

Start: 42795

End: 43763

Strand: Direct

Name: yrbG [C]

Synonym: aq_066

Alternate gene names: 15605665

Gene position: 42795-43763 (Clockwise)

Preceding gene: 15605663

Following gene: 15605677

Centisome position: 2.76

GC content: 46.03

Gene sequence:

>969_bases
ATGCTTACGGACTTAGGGCTACTGACACTCGGGTTTTTCTTACTGGTAAAAGGAGCTGATATGCTCATAGAAGGAGCTGG
AGGGCTTGCGAGGCGCTTCGGGATACCCGAATTCGTAATAGGTCTGACGCTCGTGGCTTTCGGAACATCCCTTCCCGAGT
TTACCGTGAACGTAAGTGCAGCACTCAAAGACGCTTCGGGTATTTCTCTCGGAAACGTTATAGGTTCAAATATAGCAAAC
ATTCTTCTTATCCTCGGTGTAGCTTCATTGATAAAGCCCCTTACTGTTCACGCCACATTCGTAAAAAAGGAAATTCCAGT
GAACTTTTTTCTTACGTTAACGCTCATAGTCATGGCAAACGACGTTATCTTAAATCACGCTCCAGTTTCTTTGATATCCC
GTGGGGACGGACTTGTCCTGATAATAACTTTTCTGGGATACATGTACTTCCTCGTGGCTTACTTGGAAAGGGACAGCATT
CTTGAAGGAGAGATGAAAGAAAGCATTTCTCCTTTTAAGGGCTTTATCTACTTCATTCTCGGACTTACAGGTCTTTCTCT
GGGAGCAGACTGGACGGTAGACGGCGCAGTCGGACTCGCTAAAGCTCTCGGAGTTAGTGAAGCTGTAATCGGGCTGTTTG
TCGTTGCAATAGGAACATCTCTTCCGGAACTCTTTGCCTCCGCGGTATCAGCCTATAAAGGAAACCCGGATATCGCTCTC
GGGAACGTTGCGGGTTCAAACATTTTCAACGCGACTCTAGTCCTTGGAACGAGCTCCGTTATAAGGGACATTCCCGTTCC
AGAAAGGGCTAACGTGGATTTGGGAGTTTTGTTCATTGCCACACTCTTACTTCTGATATCCTCCATCTGGGGTAAAAGGA
AGTACACGCTCGACAGAATGGAAGGAGGAATATTTTTACTGGCTTACTTTATTTACGTTATAGCTTCTTGGTACAGGGAA
CTCAGCTGA

Upstream 100 bases:

>100_bases
TTCCGAAACCTATTTCTACCTCAAGATTGGGAATTTCTACAGGTCTTTTTACCCTTTTGTAATTTACGTAACAGAGCATC
AATTATAATCTTAAACTGAA

Downstream 100 bases:

>100_bases
AGATTTCCTCGTAAAGTTTCTCGTCTATCCTCTTTAATTTGTGTCTTTCTTTTGGAACTTCGTCTACCTCAACGAAGTAT
AAACAGTTCGTTACACACTT

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MLTDLGLLTLGFFLLVKGADMLIEGAGGLARRFGIPEFVIGLTLVAFGTSLPEFTVNVSAALKDASGISLGNVIGSNIAN
ILLILGVASLIKPLTVHATFVKKEIPVNFFLTLTLIVMANDVILNHAPVSLISRGDGLVLIITFLGYMYFLVAYLERDSI
LEGEMKESISPFKGFIYFILGLTGLSLGADWTVDGAVGLAKALGVSEAVIGLFVVAIGTSLPELFASAVSAYKGNPDIAL
GNVAGSNIFNATLVLGTSSVIRDIPVPERANVDLGVLFIATLLLLISSIWGKRKYTLDRMEGGIFLLAYFIYVIASWYRE
LS

Sequences:

>Translated_322_residues
MLTDLGLLTLGFFLLVKGADMLIEGAGGLARRFGIPEFVIGLTLVAFGTSLPEFTVNVSAALKDASGISLGNVIGSNIAN
ILLILGVASLIKPLTVHATFVKKEIPVNFFLTLTLIVMANDVILNHAPVSLISRGDGLVLIITFLGYMYFLVAYLERDSI
LEGEMKESISPFKGFIYFILGLTGLSLGADWTVDGAVGLAKALGVSEAVIGLFVVAIGTSLPELFASAVSAYKGNPDIAL
GNVAGSNIFNATLVLGTSSVIRDIPVPERANVDLGVLFIATLLLLISSIWGKRKYTLDRMEGGIFLLAYFIYVIASWYRE
LS
>Mature_322_residues
MLTDLGLLTLGFFLLVKGADMLIEGAGGLARRFGIPEFVIGLTLVAFGTSLPEFTVNVSAALKDASGISLGNVIGSNIAN
ILLILGVASLIKPLTVHATFVKKEIPVNFFLTLTLIVMANDVILNHAPVSLISRGDGLVLIITFLGYMYFLVAYLERDSI
LEGEMKESISPFKGFIYFILGLTGLSLGADWTVDGAVGLAKALGVSEAVIGLFVVAIGTSLPELFASAVSAYKGNPDIAL
GNVAGSNIFNATLVLGTSSVIRDIPVPERANVDLGVLFIATLLLLISSIWGKRKYTLDRMEGGIFLLAYFIYVIASWYRE
LS

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=253, Percent_Identity=38.3399209486166, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 34256; Mature: 34256

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDLGLLTLGFFLLVKGADMLIEGAGGLARRFGIPEFVIGLTLVAFGTSLPEFTVNVSA
CCCCHHHHHHHHHHHHCCCHHEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHH
ALKDASGISLGNVIGSNIANILLILGVASLIKPLTVHATFVKKEIPVNFFLTLTLIVMAN
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DVILNHAPVSLISRGDGLVLIITFLGYMYFLVAYLERDSILEGEMKESISPFKGFIYFIL
HHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH
GLTGLSLGADWTVDGAVGLAKALGVSEAVIGLFVVAIGTSLPELFASAVSAYKGNPDIAL
HHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEE
GNVAGSNIFNATLVLGTSSVIRDIPVPERANVDLGVLFIATLLLLISSIWGKRKYTLDRM
ECCCCCCHHEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
EGGIFLLAYFIYVIASWYRELS
CCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTDLGLLTLGFFLLVKGADMLIEGAGGLARRFGIPEFVIGLTLVAFGTSLPEFTVNVSA
CCCCHHHHHHHHHHHHCCCHHEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHH
ALKDASGISLGNVIGSNIANILLILGVASLIKPLTVHATFVKKEIPVNFFLTLTLIVMAN
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DVILNHAPVSLISRGDGLVLIITFLGYMYFLVAYLERDSILEGEMKESISPFKGFIYFIL
HHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH
GLTGLSLGADWTVDGAVGLAKALGVSEAVIGLFVVAIGTSLPELFASAVSAYKGNPDIAL
HHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEE
GNVAGSNIFNATLVLGTSSVIRDIPVPERANVDLGVLFIATLLLLISSIWGKRKYTLDRM
ECCCCCCHHEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
EGGIFLLAYFIYVIASWYRELS
CCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]