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The map label for this gene is rpmB

Identifier: 15605677

GI number: 15605677

Start: 50396

End: 50605

Strand: Direct

Name: rpmB

Synonym: aq_080

Alternate gene names: 15605677

Gene position: 50396-50605 (Clockwise)

Preceding gene: 15605665

Following gene: 15605678

Centisome position: 3.25

GC content: 47.62

Gene sequence:

>210_bases
ATGGCTGATAGTGAGATTTGTGGAAAGAGACCTGTTGTCGGAAGGAGAGTCACCTTATCGGGTGAGAGGAACAGAAGGAT
TTTTAAACCGAACGTCCATAAGATGAGGGTAATGCTCCCGGATGGAACGGTAAAGAGGATGTACGTGTGCACCAAGTGCC
TCAAGGCGGGTAAGGTAATGAAAGCACCCAGAATTCCCAAGGAAGGTTAA

Upstream 100 bases:

>100_bases
ATGAACTTCTGTCTTAGTTCTTTTAATTCAAAGAGGGCTTTTAAGTACTCGGACATGTTAAAAGATTTTAATATAATAAA
GTTCTCTCGGAGGTAGAAGA

Downstream 100 bases:

>100_bases
TGTCTTTAAGGTATTTGAGATTTCTGACAGCCGGAGAGTCCCACGGTAAGGGTTTGACCGCAATACTGGAGGGTATACCC
GCAAACTTACCCCTTTCCGA

Product: ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MADSEICGKRPVVGRRVTLSGERNRRIFKPNVHKMRVMLPDGTVKRMYVCTKCLKAGKVMKAPRIPKEG

Sequences:

>Translated_69_residues
MADSEICGKRPVVGRRVTLSGERNRRIFKPNVHKMRVMLPDGTVKRMYVCTKCLKAGKVMKAPRIPKEG
>Mature_68_residues
ADSEICGKRPVVGRRVTLSGERNRRIFKPNVHKMRVMLPDGTVKRMYVCTKCLKAGKVMKAPRIPKEG

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_AQUAE (O66492)

Other databases:

- EMBL:   AE000657
- PIR:   A70308
- RefSeq:   NP_213052.1
- ProteinModelPortal:   O66492
- SMR:   O66492
- GeneID:   1192505
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_080
- NMPDR:   fig|224324.1.peg.67
- HOGENOM:   HBG597003
- OMA:   ISHSHRV
- BioCyc:   AAEO224324:AQ_080-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 7827; Mature: 7695

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSEICGKRPVVGRRVTLSGERNRRIFKPNVHKMRVMLPDGTVKRMYVCTKCLKAGKVM
CCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
KAPRIPKEG
CCCCCCCCC
>Mature Secondary Structure 
ADSEICGKRPVVGRRVTLSGERNRRIFKPNVHKMRVMLPDGTVKRMYVCTKCLKAGKVM
CCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
KAPRIPKEG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320