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The map label for this gene is rpl30p

Identifier: 11499488

GI number: 11499488

Start: 1714908

End: 1715366

Strand: Reverse

Name: rpl30p

Synonym: AF1904

Alternate gene names: 11499488

Gene position: 1715366-1714908 (Counterclockwise)

Preceding gene: 11499489

Following gene: 11499487

Centisome position: 78.74

GC content: 49.67

Gene sequence:

>459_bases
ATGTTTGCAGTTGTCAGGATGAGGGGAACTGTTGATGTTCACCGCAAAATAAAGGAAACCCTGAAAATGCTCAGGCTCCA
CAAGCGCTACCACTGCGTGGTCATTCCCGACACTCCCTCATACAGAGGAATGCTTCAGGTTGTGAAGGATTACGTTGCCT
ACGGTGAAATCAACGCCGAAACCCTTGCATTGCTTCTCAGGCTGAGGGGAAGGCTTACTGGAAACAGGAAGCTGACAGAC
GAGTACGTGAAGGAGAAGACGGGCTACGAGACCATTGAGGAGTTTGCAAAGGCAGTGGTCGAGGGAAAAGCAAGCCTTAA
GGACTTGCCTGATCTCAAGCCAGTCTTCAGGCTCCACCCCCCGAGAAAAGGTATAAAGAACATTAAGTGGCACTATCCGA
GAGGTAATTTGGGCTATCACGGTGAGGAAATCAACAGGCTGCTTTACAAGATGAGGTGA

Upstream 100 bases:

>100_bases
TCTGGAGCTTCACCAAGGGGCAGACCAAAACAACCGTGAACTTCGCAAAGGCGACTTATGAGGCTTTGAAGAAGACGATG
TACGTGAAGAGGTGAGGAGA

Downstream 100 bases:

>100_bases
TTTTGATGCCAAAGAAGAAGGTAAAGAAGTTCCGAGGTTCGAGAACCTTTGGATGGGGCAGTCACAAGAACAGAAGAGGT
AGGGGTAACAGAGGAGGTGC

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFAVVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLALLLRLRGRLTGNRKLTD
EYVKEKTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHPPRKGIKNIKWHYPRGNLGYHGEEINRLLYKMR

Sequences:

>Translated_152_residues
MFAVVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLALLLRLRGRLTGNRKLTD
EYVKEKTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHPPRKGIKNIKWHYPRGNLGYHGEEINRLLYKMR
>Mature_152_residues
MFAVVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLALLLRLRGRLTGNRKLTD
EYVKEKTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHPPRKGIKNIKWHYPRGNLGYHGEEINRLLYKMR

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_ARCFU (O28375)

Other databases:

- EMBL:   AE000782
- PIR:   G69487
- RefSeq:   NP_070729.1
- ProteinModelPortal:   O28375
- SMR:   O28375
- GeneID:   1485127
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1904
- NMPDR:   fig|224325.1.peg.1890
- TIGR:   AF_1904
- HOGENOM:   HBG297538
- OMA:   DYITWGE
- ProtClustDB:   PRK06049
- BioCyc:   AFUL224325:AF_1904-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR018038
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 17805; Mature: 17805

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAVVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAE
CEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHCCCCHH
TLALLLRLRGRLTGNRKLTDEYVKEKTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHP
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
PRKGIKNIKWHYPRGNLGYHGEEINRLLYKMR
CCCCCCCCEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFAVVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAE
CEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHCCCCHH
TLALLLRLRGRLTGNRKLTDEYVKEKTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHP
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
PRKGIKNIKWHYPRGNLGYHGEEINRLLYKMR
CCCCCCCCEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475