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The map label for this gene is rpl15P

Identifier: 11499487

GI number: 11499487

Start: 1714372

End: 1714911

Strand: Reverse

Name: rpl15P

Synonym: AF1903

Alternate gene names: 11499487

Gene position: 1714911-1714372 (Counterclockwise)

Preceding gene: 11499488

Following gene: 11499486

Centisome position: 78.72

GC content: 50.37

Gene sequence:

>540_bases
GTGATTTTGATGCCAAAGAAGAAGGTAAAGAAGTTCCGAGGTTCGAGAACCTTTGGATGGGGCAGTCACAAGAACAGAAG
AGGTAGGGGTAACAGAGGAGGTGCGGGTAACGCTGGAGTTCACAAGCACAAGTACATCAAATTCGTGAAGCTCGCAAAGA
AGGGCGAGTACTTGTTTGGAAAGCACGGCTTTACGAGGCCCAAGATACTGAGGAAGGACTACCTGAACGTTCAGGCGGTT
AAGGAAACCCTGAGGTGGCTCAAGGAAGAAGGGAAGCTCGACGACTACACCTATCGTTATCTCTACTCAAGGCCTGAGCT
GAATGCAGGCGACCTTGACGAGATAATCGACAGACTCGCAAGCTTGGGGCTGGCGGAGAAGGAAGGGGACGTTTACAGAA
TTGATTTGGCGGAACTTGGCTACAGCAAGCTTCTTGGCTCTGGAAAGGTAACGAGGAAAATGGAGGTTAAAGTCTTTGAG
GCAACGCCCAAGGCTGTCGAGAAGATTGAGGCTGCTGGAGGTAAGGTAGTGGCTGAGTAA

Upstream 100 bases:

>100_bases
ACCCCCCGAGAAAAGGTATAAAGAACATTAAGTGGCACTATCCGAGAGGTAATTTGGGCTATCACGGTGAGGAAATCAAC
AGGCTGCTTTACAAGATGAG

Downstream 100 bases:

>100_bases
AGGGGTTGATCGAATTGGACTCCGTGATAAGAGCCTTACAACCTTATTTTGAGCGCATACCCAGTGTAGAGAGGCCAAAG
GGACATGTCCACTTCAGGGA

Product: 50S ribosomal protein L15P (rpl15P)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MILMPKKKVKKFRGSRTFGWGSHKNRRGRGNRGGAGNAGVHKHKYIKFVKLAKKGEYLFGKHGFTRPKILRKDYLNVQAV
KETLRWLKEEGKLDDYTYRYLYSRPELNAGDLDEIIDRLASLGLAEKEGDVYRIDLAELGYSKLLGSGKVTRKMEVKVFE
ATPKAVEKIEAAGGKVVAE

Sequences:

>Translated_179_residues
MILMPKKKVKKFRGSRTFGWGSHKNRRGRGNRGGAGNAGVHKHKYIKFVKLAKKGEYLFGKHGFTRPKILRKDYLNVQAV
KETLRWLKEEGKLDDYTYRYLYSRPELNAGDLDEIIDRLASLGLAEKEGDVYRIDLAELGYSKLLGSGKVTRKMEVKVFE
ATPKAVEKIEAAGGKVVAE
>Mature_179_residues
MILMPKKKVKKFRGSRTFGWGSHKNRRGRGNRGGAGNAGVHKHKYIKFVKLAKKGEYLFGKHGFTRPKILRKDYLNVQAV
KETLRWLKEEGKLDDYTYRYLYSRPELNAGDLDEIIDRLASLGLAEKEGDVYRIDLAELGYSKLLGSGKVTRKMEVKVFE
ATPKAVEKIEAAGGKVVAE

Specific function: Binds to the 23S rRNA

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15_ARCFU (O28376)

Other databases:

- EMBL:   AE000782
- PIR:   F69487
- RefSeq:   NP_070728.1
- ProteinModelPortal:   O28376
- SMR:   O28376
- GeneID:   1485126
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1903
- NMPDR:   fig|224325.1.peg.1889
- TIGR:   AF_1903
- HOGENOM:   HBG727142
- OMA:   VGFHKHK
- ProtClustDB:   CLSK2747074
- BioCyc:   AFUL224325:AF_1903-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01341_A
- InterPro:   IPR001196
- InterPro:   IPR021131
- InterPro:   IPR015974
- Gene3D:   G3DSA:1.10.1200.60

Pfam domain/function: PF00828 Ribosomal_L18e; SSF52080 Ribosomal_L18e/L15

EC number: NA

Molecular weight: Translated: 20289; Mature: 20289

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILMPKKKVKKFRGSRTFGWGSHKNRRGRGNRGGAGNAGVHKHKYIKFVKLAKKGEYLFG
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
KHGFTRPKILRKDYLNVQAVKETLRWLKEEGKLDDYTYRYLYSRPELNAGDLDEIIDRLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
SLGLAEKEGDVYRIDLAELGYSKLLGSGKVTRKMEVKVFEATPKAVEKIEAAGGKVVAE
HCCCCCCCCCEEEEEHHHCCHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MILMPKKKVKKFRGSRTFGWGSHKNRRGRGNRGGAGNAGVHKHKYIKFVKLAKKGEYLFG
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
KHGFTRPKILRKDYLNVQAVKETLRWLKEEGKLDDYTYRYLYSRPELNAGDLDEIIDRLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
SLGLAEKEGDVYRIDLAELGYSKLLGSGKVTRKMEVKVFEATPKAVEKIEAAGGKVVAE
HCCCCCCCCCEEEEEHHHCCHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475