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Identifier: 11499461

GI number: 11499461

Start: 1688164

End: 1688733

Strand: Reverse

Name: Not Available

Synonym: AF1877

Alternate gene names: NA

Gene position: 1688733-1688164 (Counterclockwise)

Preceding gene: 11499462

Following gene: 11499453

Centisome position: 77.52

GC content: 45.44

Gene sequence:

>570_bases
ATGAGGGGTTTGTTCAGAAGTGGTAAAATGGATGTTAGCGACATAGTTCAGTATCTTTATTGCCCGAGGAAGCTTTATTT
TTTAAAAATAGCAGGGATAAGGATTTCTAAGCCGAAAATGGAGGAGGGAAAGGCTGCGCAGGAAGAGGCGAGGGGAAAGC
TGAGGAGCTTTGCCAGAAAGTTGAAAGGAGAGCTTTTAACGTCGGTTTATCTTGAGAGCAAAAGATATGGGCTGAAGGGT
GTGCTCGACGCTCTTGTGATTGTTGATGGAGGGGCCTTTCCCGTTGACGTGAAGCTGACGAGATTTCAGTCCATCACCTA
CGCATGGAAGATGCAGCTAACTGCCTACGCCCTGCTTGTTGAGGAGAACTACGCAGTTGAGGTGAGGAAGGGTTATCTCT
TTCTTCTCAATCAGGGAAAATTTGTGGAGGTCAGCATATCTCCTGATGACAGGAAAGCACTTTTAAGGATAATAAAGGAA
ATAGAGAGGCTGATTGAGGAAGAAAAGTATCCCAGAACGTCCAAATCGAAAAAGTGCGGTTACTGCGAAGTTAGGGAGTT
CTGCGTTTAG

Upstream 100 bases:

>100_bases
GACTCAAAAACGCAATACAGGGGTAGAAACCTTGCATACTCCTCCATTATCCTCCTGCACGCCAGAGATGTTGTTGCTTT
TCTAAGAGGAGAGAGGAGGT

Downstream 100 bases:

>100_bases
CTGCTTGGGAGTTGTGAGCCATTAAACGAACTCCACTCCCTTCTCCTTTACAAGCTCAACTCCCGTGTTGCTGATTACAA
TTGCGGTGGAGGAGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRGLFRSGKMDVSDIVQYLYCPRKLYFLKIAGIRISKPKMEEGKAAQEEARGKLRSFARKLKGELLTSVYLESKRYGLKG
VLDALVIVDGGAFPVDVKLTRFQSITYAWKMQLTAYALLVEENYAVEVRKGYLFLLNQGKFVEVSISPDDRKALLRIIKE
IERLIEEEKYPRTSKSKKCGYCEVREFCV

Sequences:

>Translated_189_residues
MRGLFRSGKMDVSDIVQYLYCPRKLYFLKIAGIRISKPKMEEGKAAQEEARGKLRSFARKLKGELLTSVYLESKRYGLKG
VLDALVIVDGGAFPVDVKLTRFQSITYAWKMQLTAYALLVEENYAVEVRKGYLFLLNQGKFVEVSISPDDRKALLRIIKE
IERLIEEEKYPRTSKSKKCGYCEVREFCV
>Mature_189_residues
MRGLFRSGKMDVSDIVQYLYCPRKLYFLKIAGIRISKPKMEEGKAAQEEARGKLRSFARKLKGELLTSVYLESKRYGLKG
VLDALVIVDGGAFPVDVKLTRFQSITYAWKMQLTAYALLVEENYAVEVRKGYLFLLNQGKFVEVSISPDDRKALLRIIKE
IERLIEEEKYPRTSKSKKCGYCEVREFCV

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21783; Mature: 21783

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLFRSGKMDVSDIVQYLYCPRKLYFLKIAGIRISKPKMEEGKAAQEEARGKLRSFARK
CCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHH
LKGELLTSVYLESKRYGLKGVLDALVIVDGGAFPVDVKLTRFQSITYAWKMQLTAYALLV
HHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCEEEEEEEHHHHHHHHHHHHHEEEEEEE
EENYAVEVRKGYLFLLNQGKFVEVSISPDDRKALLRIIKEIERLIEEEKYPRTSKSKKCG
ECCCEEEEECCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YCEVREFCV
CHHHHHHCC
>Mature Secondary Structure
MRGLFRSGKMDVSDIVQYLYCPRKLYFLKIAGIRISKPKMEEGKAAQEEARGKLRSFARK
CCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHH
LKGELLTSVYLESKRYGLKGVLDALVIVDGGAFPVDVKLTRFQSITYAWKMQLTAYALLV
HHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCEEEEEEEHHHHHHHHHHHHHEEEEEEE
EENYAVEVRKGYLFLLNQGKFVEVSISPDDRKALLRIIKEIERLIEEEKYPRTSKSKKCG
ECCCEEEEECCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YCEVREFCV
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA