Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11499453

GI number: 11499453

Start: 1681502

End: 1682143

Strand: Reverse

Name: Not Available

Synonym: AF1869

Alternate gene names: NA

Gene position: 1682143-1681502 (Counterclockwise)

Preceding gene: 11499461

Following gene: 11499452

Centisome position: 77.22

GC content: 46.57

Gene sequence:

>642_bases
ATGAGAACTGCACTAATCGCCACACTCGGCTTTGACGAAAAATTCTGTTACAGAGCCATACTCCGGCACGGAATCAAAGA
AGGGGACAGAGTAATCCTTATAACGACGCAGATGGTTGAAAGAGTGGCAAAGGCTTACGAGTGGATTCGAAAGCTTCTGG
AAACTTCCTACGGAGACAGGGTGGAGGTTGAAGTTCTACAGGTTGAGCTGAAGAGTGTTGAAAAAGCAATCAGAGAGGTT
GCGGATAAAATCAAAGAGGTTGAGGGCTATGATTTGGTTGTTGTTAATATCAGCGGAGGTATGAGAGTTTTGGTCGTCAT
CGTGCTTCTCGCATGCATGTTGGGGCTGCCAGAAAACCTGAAAGTTGAGATTGAGAAAGAAGATTTCTCTGATATTGTGG
AGCTGCCCGTTGGAGTTCTGAAAATAGTCAAGTCACCGCTTGGTGATGATAAAGTTGAAGTCCTTAAGGCCGTTATGAAC
GGGCTGAGAGACGTGAGAGGCTTATCCAAGCACTTGGGCAAGGATGAGAGCACCATAAGGAGGCATCTTGCAGCTCTTGA
GAAGATGGGGTTGATTGAGGTGAAGAAGAGAAAGCCCCTGATTGTGAGTGCAACCGAACTCGCTGGGTTGATTGTACCGT
AA

Upstream 100 bases:

>100_bases
CGAAACTCATGGTAGAACTCATACTTCATTTAATATAAATCTTTCTGCTACCAATATACATCGGAAAAGGCTAAATATTG
CTTTCAAATTAACAACGTGT

Downstream 100 bases:

>100_bases
CACTGTAAAATGAGCACATTTCGAAAGCTTAATATTTTCCTTTGATAGCCAGTGTGCATGTACAGTGCTACCTTTACTCT
TGAGGCTATCACTCCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TrmB

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRTALIATLGFDEKFCYRAILRHGIKEGDRVILITTQMVERVAKAYEWIRKLLETSYGDRVEVEVLQVELKSVEKAIREV
ADKIKEVEGYDLVVVNISGGMRVLVVIVLLACMLGLPENLKVEIEKEDFSDIVELPVGVLKIVKSPLGDDKVEVLKAVMN
GLRDVRGLSKHLGKDESTIRRHLAALEKMGLIEVKKRKPLIVSATELAGLIVP

Sequences:

>Translated_213_residues
MRTALIATLGFDEKFCYRAILRHGIKEGDRVILITTQMVERVAKAYEWIRKLLETSYGDRVEVEVLQVELKSVEKAIREV
ADKIKEVEGYDLVVVNISGGMRVLVVIVLLACMLGLPENLKVEIEKEDFSDIVELPVGVLKIVKSPLGDDKVEVLKAVMN
GLRDVRGLSKHLGKDESTIRRHLAALEKMGLIEVKKRKPLIVSATELAGLIVP
>Mature_213_residues
MRTALIATLGFDEKFCYRAILRHGIKEGDRVILITTQMVERVAKAYEWIRKLLETSYGDRVEVEVLQVELKSVEKAIREV
ADKIKEVEGYDLVVVNISGGMRVLVVIVLLACMLGLPENLKVEIEKEDFSDIVELPVGVLKIVKSPLGDDKVEVLKAVMN
GLRDVRGLSKHLGKDESTIRRHLAALEKMGLIEVKKRKPLIVSATELAGLIVP

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23796; Mature: 23796

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTALIATLGFDEKFCYRAILRHGIKEGDRVILITTQMVERVAKAYEWIRKLLETSYGDR
CCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
VEVEVLQVELKSVEKAIREVADKIKEVEGYDLVVVNISGGMRVLVVIVLLACMLGLPENL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
KVEIEKEDFSDIVELPVGVLKIVKSPLGDDKVEVLKAVMNGLRDVRGLSKHLGKDESTIR
EEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RHLAALEKMGLIEVKKRKPLIVSATELAGLIVP
HHHHHHHHCCCCEECCCCCEEEEHHHHHCCCCC
>Mature Secondary Structure
MRTALIATLGFDEKFCYRAILRHGIKEGDRVILITTQMVERVAKAYEWIRKLLETSYGDR
CCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
VEVEVLQVELKSVEKAIREVADKIKEVEGYDLVVVNISGGMRVLVVIVLLACMLGLPENL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
KVEIEKEDFSDIVELPVGVLKIVKSPLGDDKVEVLKAVMNGLRDVRGLSKHLGKDESTIR
EEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RHLAALEKMGLIEVKKRKPLIVSATELAGLIVP
HHHHHHHHCCCCEECCCCCEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA