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Identifier: 11499376

GI number: 11499376

Start: 1605070

End: 1605999

Strand: Reverse

Name: Not Available

Synonym: AF1787

Alternate gene names: NA

Gene position: 1605999-1605070 (Counterclockwise)

Preceding gene: 11499377

Following gene: 11499375

Centisome position: 73.72

GC content: 49.57

Gene sequence:

>930_bases
ATGTACGCCGCCCTGATAGAATCAGTCGTCAAGATCCTTCAGAAGGCTGAATTTTCCGTTGCAGACTTAGCTGAGACTAA
GCCGAGATGCTTCGATATCGTGGCGAGAAAAGATGACGTGGTTTTGCTCATAAAAGTACTCTACAATGTGGACTCTCTCA
AACCTGAGGCGGCGGAAGAGATGAAGAAGCTGACGAAAATCCTTCAGGCAAGCCCCATCGTTATCGGGGAGAGGTTCAAG
TTCGACTTTCTTGAGAGGGGTGTTGTTTACACACGCTACGGCTTACCGGTAATCAACCTCGCCACCTTCTACGACTTCAT
CGTGGAGGGGATTTACCCCTACGTTTACTCCGCTCCCGGCGGTTACTACGTGAAGCTCGACAGCGAGAGAATAAGGGAGG
CGAGGGAGAGGTTAGGACTTAGCGTAGGAGACATGGCAAAGATGCTCGGAGTTTCGAGGAGGACTGTAAAGAAGTACGAA
GAGGGGACGGACACCACTCTTTCGACGGCAGCAAAAATTGAGGAAATCATCGGTACCTTTGCGATAAAGGAAATAGACCT
GCTCAACTTTGTTGAGGCTGACATTAGCGAGGAGGAAGAGGTTGAGGGGGAGGAAGGGGAGATAATAGAGCAGCTTAGAG
TTATTGGGCTTTCGGTGTATCCGGTAAGGCAGGCTCCCTTCGATGCAGTCTCGCAGGCTAAAGAGGATCAGATTCTTACG
GGATTCAAGCAGGTTAGGGAGATTGAGAAAAGGGCAAGGCTCCTCGGAAGGATATCAGAAGCGATAGATGCTGAGGCTGC
GTACATCACCGACAAGGCCTGCAAGAAGAAGGTTGAATCTGTTGTTTTTGTCTTAAAAGAGGAGCTTTACTCCGTCAGCA
GCGCGAAGGACTTTATCTCCCTTCTGAAAGAAAAGAGCTGTGAGGAGTGA

Upstream 100 bases:

>100_bases
AGAATGCCTCAAAATTGTTGAGGAAGCTGTTAAAAAGGTCTGGGAAGAGAAAATCCAGAGGACATAAATCTTATATAGAA
ACTCATATACATCATTGTAG

Downstream 100 bases:

>100_bases
GGTGGTGAACATGCTGGAGTACCTGTATCCGCTCAGAACGTATTTGATAGTTTCGGGTGTTGAGAAGCCGAATGTAATGA
CTGCTGACTGGGTTGTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MYAALIESVVKILQKAEFSVADLAETKPRCFDIVARKDDVVLLIKVLYNVDSLKPEAAEEMKKLTKILQASPIVIGERFK
FDFLERGVVYTRYGLPVINLATFYDFIVEGIYPYVYSAPGGYYVKLDSERIREARERLGLSVGDMAKMLGVSRRTVKKYE
EGTDTTLSTAAKIEEIIGTFAIKEIDLLNFVEADISEEEEVEGEEGEIIEQLRVIGLSVYPVRQAPFDAVSQAKEDQILT
GFKQVREIEKRARLLGRISEAIDAEAAYITDKACKKKVESVVFVLKEELYSVSSAKDFISLLKEKSCEE

Sequences:

>Translated_309_residues
MYAALIESVVKILQKAEFSVADLAETKPRCFDIVARKDDVVLLIKVLYNVDSLKPEAAEEMKKLTKILQASPIVIGERFK
FDFLERGVVYTRYGLPVINLATFYDFIVEGIYPYVYSAPGGYYVKLDSERIREARERLGLSVGDMAKMLGVSRRTVKKYE
EGTDTTLSTAAKIEEIIGTFAIKEIDLLNFVEADISEEEEVEGEEGEIIEQLRVIGLSVYPVRQAPFDAVSQAKEDQILT
GFKQVREIEKRARLLGRISEAIDAEAAYITDKACKKKVESVVFVLKEELYSVSSAKDFISLLKEKSCEE
>Mature_309_residues
MYAALIESVVKILQKAEFSVADLAETKPRCFDIVARKDDVVLLIKVLYNVDSLKPEAAEEMKKLTKILQASPIVIGERFK
FDFLERGVVYTRYGLPVINLATFYDFIVEGIYPYVYSAPGGYYVKLDSERIREARERLGLSVGDMAKMLGVSRRTVKKYE
EGTDTTLSTAAKIEEIIGTFAIKEIDLLNFVEADISEEEEVEGEEGEIIEQLRVIGLSVYPVRQAPFDAVSQAKEDQILT
GFKQVREIEKRARLLGRISEAIDAEAAYITDKACKKKVESVVFVLKEELYSVSSAKDFISLLKEKSCEE

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1787_ARCFU (O28487)

Other databases:

- EMBL:   AE000782
- PIR:   B69473
- RefSeq:   NP_070615.1
- ProteinModelPortal:   O28487
- GeneID:   1485010
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1787
- NMPDR:   fig|224325.1.peg.1776
- TIGR:   AF_1787
- HOGENOM:   HBG626911
- OMA:   GGLYVNI
- ProtClustDB:   PRK04140
- BioCyc:   AFUL224325:AF_1787-MONOMER
- HAMAP:   MF_00584
- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 34830; Mature: 34830

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAALIESVVKILQKAEFSVADLAETKPRCFDIVARKDDVVLLIKVLYNVDSLKPEAAEE
CHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHH
MKKLTKILQASPIVIGERFKFDFLERGVVYTRYGLPVINLATFYDFIVEGIYPYVYSAPG
HHHHHHHHHCCCCEECCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCC
GYYVKLDSERIREARERLGLSVGDMAKMLGVSRRTVKKYEEGTDTTLSTAAKIEEIIGTF
CEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AIKEIDLLNFVEADISEEEEVEGEEGEIIEQLRVIGLSVYPVRQAPFDAVSQAKEDQILT
HHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
GFKQVREIEKRARLLGRISEAIDAEAAYITDKACKKKVESVVFVLKEELYSVSSAKDFIS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEKSCEE
HHHHHCCCC
>Mature Secondary Structure
MYAALIESVVKILQKAEFSVADLAETKPRCFDIVARKDDVVLLIKVLYNVDSLKPEAAEE
CHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHH
MKKLTKILQASPIVIGERFKFDFLERGVVYTRYGLPVINLATFYDFIVEGIYPYVYSAPG
HHHHHHHHHCCCCEECCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCC
GYYVKLDSERIREARERLGLSVGDMAKMLGVSRRTVKKYEEGTDTTLSTAAKIEEIIGTF
CEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AIKEIDLLNFVEADISEEEEVEGEEGEIIEQLRVIGLSVYPVRQAPFDAVSQAKEDQILT
HHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
GFKQVREIEKRARLLGRISEAIDAEAAYITDKACKKKVESVVFVLKEELYSVSSAKDFIS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEKSCEE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475