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Identifier: 11499133

GI number: 11499133

Start: 1386140

End: 1387600

Strand: Reverse

Name: Not Available

Synonym: AF1538

Alternate gene names: 11499133

Gene position: 1387600-1386140 (Counterclockwise)

Preceding gene: 11499134

Following gene: 11499132

Centisome position: 63.7

GC content: 46.2

Gene sequence:

>1461_bases
ATGGAGGATGGGCGGTACAGCGCCCTGGAGAGAATGGGAGCAAGACTGTGCGCAAGCGTGGAGAAATGGATGCCGGACCC
ATTAATCTTTGCTCTGCTTCTGACTTTGGTGACTTATCTGTTGGTAATAGTGGTGATGAAGCCGTACACAGTGATGGATG
CGGGAACGATGGTTAAGTGGCTCCTCGTGGATGTTTGGTACAAAGGCTTCTGGGGTCTCCTGTCCTTCGCCATGCAAATG
TGTTTGATTCTTGTTACCGGTTATGCAATAGCCTATCATCCAATCGTTTACAGGATTTTGAAAAAGATAGCGACACTCCC
TTCAGATACTAAATCGGCTGCAGCTCTTACGGCACTTATTGCAATGATTGCAGCTTGGATAAACTGGGGACTTGGACTTA
TAGTTGGGGCCATTTTGGCCAGAACAATTGGAATTGAATTCTACAGAACAGGAAAGCCATTGCACTATCCGGCTGTAGTA
GCAGCCGGTTATGCCGGTTTAGGACTTACTTGGCATTGGGGTTTATCGGCTTCTGCACCATTATTGATTAACACGCCAAA
TCACTTTCTAAAGGATGTTTTCGTGGAGTTGTTCGGCAGGGAGACAGTTCCGCTGAACGAGACCATCTTTCATCCATATA
CTCTTATAAATCTGGCAATAATCATTTCTTTCGGGGTACTGGCTTATTACGCGCTTGCGCCTAACAGGGGTGAATTGAAA
GGAATAGACAAAGTTGCACCACACATAATTGAGCTGGTGAAGAAAGAAAAGGAAGAGGAGCTGAAAGAAAAAAGTAAAGA
GCGCGTAACGATTGCTGACAAGCTTGAGAACAGTAAAGTTCTCGCCCTACTAATAAGCATATTGGGGATTATCACGATGG
GCTACTGGTTCTACGAGAAAGGCTTTTTCGGTGGACTAAACCTAAATTCGCTGAATTTTACGTTTATAATGGTTGGCCTT
CTTCTCTACATGAATCCCATAGCTTACATGAGGGCTATCACCAGAGCGGCAGGAGCAGTAGCAGGAATACTGGTTCAGTT
TCCGTTCTATGCGGGTATTATGGGAATGATGAGGTACAGTGCAGTTGTTGCAGGGGGACCAAATCTTGCAACTGTTATAG
CCAACAGTATAGCGAGCGTTGCAACGCCGTTTACGTGGCCGGCAATATGTTTATACATTGCAGGGCTGATAAACATATTC
ATACCTTCTGGAGGTGGAGAATGGGCAGCAGTTGGAGAGATTTTAGCAAGAACGTCAGCTGCCCTGGGTGTGCCTATTGG
AAAAACCGTAATTGCTTATGGTGTAGGGGACGCTTGGACAAACCTCTTCCAGCCATTCTGGGCGATTCCTCTCCTCGGAC
TTACGGGAACAAGGGCCAGAGATGTTTTTGGATACACGATCTCCGTGATGATATTGGCAACCATTCCGCTCTCGCTCGGT
TTAGTTCTCGTTCCATATTGA

Upstream 100 bases:

>100_bases
TGAAATTTTGGTTTGTTTTGTTTGATTGCAGATTTGCACTTTAGAAACTTTTTTAAATTATAATTCTAAAAATTAATACG
GCAAAAATGGGGGTGGAATT

Downstream 100 bases:

>100_bases
TCTAATTTTTTTTATATTGAGGAGGGAAAAGCTATGCTGGAGAGAGTATTCATCGACGTGGATGGAGTAAAGGTCTCTCT
CCTCAAAGGGAGGGAGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MEDGRYSALERMGARLCASVEKWMPDPLIFALLLTLVTYLLVIVVMKPYTVMDAGTMVKWLLVDVWYKGFWGLLSFAMQM
CLILVTGYAIAYHPIVYRILKKIATLPSDTKSAAALTALIAMIAAWINWGLGLIVGAILARTIGIEFYRTGKPLHYPAVV
AAGYAGLGLTWHWGLSASAPLLINTPNHFLKDVFVELFGRETVPLNETIFHPYTLINLAIIISFGVLAYYALAPNRGELK
GIDKVAPHIIELVKKEKEEELKEKSKERVTIADKLENSKVLALLISILGIITMGYWFYEKGFFGGLNLNSLNFTFIMVGL
LLYMNPIAYMRAITRAAGAVAGILVQFPFYAGIMGMMRYSAVVAGGPNLATVIANSIASVATPFTWPAICLYIAGLINIF
IPSGGGEWAAVGEILARTSAALGVPIGKTVIAYGVGDAWTNLFQPFWAIPLLGLTGTRARDVFGYTISVMILATIPLSLG
LVLVPY

Sequences:

>Translated_486_residues
MEDGRYSALERMGARLCASVEKWMPDPLIFALLLTLVTYLLVIVVMKPYTVMDAGTMVKWLLVDVWYKGFWGLLSFAMQM
CLILVTGYAIAYHPIVYRILKKIATLPSDTKSAAALTALIAMIAAWINWGLGLIVGAILARTIGIEFYRTGKPLHYPAVV
AAGYAGLGLTWHWGLSASAPLLINTPNHFLKDVFVELFGRETVPLNETIFHPYTLINLAIIISFGVLAYYALAPNRGELK
GIDKVAPHIIELVKKEKEEELKEKSKERVTIADKLENSKVLALLISILGIITMGYWFYEKGFFGGLNLNSLNFTFIMVGL
LLYMNPIAYMRAITRAAGAVAGILVQFPFYAGIMGMMRYSAVVAGGPNLATVIANSIASVATPFTWPAICLYIAGLINIF
IPSGGGEWAAVGEILARTSAALGVPIGKTVIAYGVGDAWTNLFQPFWAIPLLGLTGTRARDVFGYTISVMILATIPLSLG
LVLVPY
>Mature_486_residues
MEDGRYSALERMGARLCASVEKWMPDPLIFALLLTLVTYLLVIVVMKPYTVMDAGTMVKWLLVDVWYKGFWGLLSFAMQM
CLILVTGYAIAYHPIVYRILKKIATLPSDTKSAAALTALIAMIAAWINWGLGLIVGAILARTIGIEFYRTGKPLHYPAVV
AAGYAGLGLTWHWGLSASAPLLINTPNHFLKDVFVELFGRETVPLNETIFHPYTLINLAIIISFGVLAYYALAPNRGELK
GIDKVAPHIIELVKKEKEEELKEKSKERVTIADKLENSKVLALLISILGIITMGYWFYEKGFFGGLNLNSLNFTFIMVGL
LLYMNPIAYMRAITRAAGAVAGILVQFPFYAGIMGMMRYSAVVAGGPNLATVIANSIASVATPFTWPAICLYIAGLINIF
IPSGGGEWAAVGEILARTSAALGVPIGKTVIAYGVGDAWTNLFQPFWAIPLLGLTGTRARDVFGYTISVMILATIPLSLG
LVLVPY

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=474, Percent_Identity=35.2320675105485, Blast_Score=273, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 53017; Mature: 53017

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDGRYSALERMGARLCASVEKWMPDPLIFALLLTLVTYLLVIVVMKPYTVMDAGTMVKW
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHH
LLVDVWYKGFWGLLSFAMQMCLILVTGYAIAYHPIVYRILKKIATLPSDTKSAAALTALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AMIAAWINWGLGLIVGAILARTIGIEFYRTGKPLHYPAVVAAGYAGLGLTWHWGLSASAP
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCCCEEECCCCCCCC
LLINTPNHFLKDVFVELFGRETVPLNETIFHPYTLINLAIIISFGVLAYYALAPNRGELK
EEEECCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GIDKVAPHIIELVKKEKEEELKEKSKERVTIADKLENSKVLALLISILGIITMGYWFYEK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GFFGGLNLNSLNFTFIMVGLLLYMNPIAYMRAITRAAGAVAGILVQFPFYAGIMGMMRYS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVAGGPNLATVIANSIASVATPFTWPAICLYIAGLINIFIPSGGGEWAAVGEILARTSA
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
ALGVPIGKTVIAYGVGDAWTNLFQPFWAIPLLGLTGTRARDVFGYTISVMILATIPLSLG
HCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LVLVPY
EEEECC
>Mature Secondary Structure
MEDGRYSALERMGARLCASVEKWMPDPLIFALLLTLVTYLLVIVVMKPYTVMDAGTMVKW
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHH
LLVDVWYKGFWGLLSFAMQMCLILVTGYAIAYHPIVYRILKKIATLPSDTKSAAALTALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AMIAAWINWGLGLIVGAILARTIGIEFYRTGKPLHYPAVVAAGYAGLGLTWHWGLSASAP
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCCCEEECCCCCCCC
LLINTPNHFLKDVFVELFGRETVPLNETIFHPYTLINLAIIISFGVLAYYALAPNRGELK
EEEECCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GIDKVAPHIIELVKKEKEEELKEKSKERVTIADKLENSKVLALLISILGIITMGYWFYEK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GFFGGLNLNSLNFTFIMVGLLLYMNPIAYMRAITRAAGAVAGILVQFPFYAGIMGMMRYS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVAGGPNLATVIANSIASVATPFTWPAICLYIAGLINIFIPSGGGEWAAVGEILARTSA
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
ALGVPIGKTVIAYGVGDAWTNLFQPFWAIPLLGLTGTRARDVFGYTISVMILATIPLSLG
HCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LVLVPY
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]