Click here to switch to the map view.

The map label for this gene is fdx-7

Identifier: 11498838

GI number: 11498838

Start: 1106980

End: 1107204

Strand: Reverse

Name: fdx-7

Synonym: AF1239

Alternate gene names: NA

Gene position: 1107204-1106980 (Counterclockwise)

Preceding gene: 11498839

Following gene: 11498836

Centisome position: 50.83

GC content: 52.89

Gene sequence:

>225_bases
ATGAAGTTCAGAGTGGAGTTCGACCCAAGGAGATGCGGCGCTGCTGGAGAGTGCGTTGACGTCTGCAAGAACGGCGTGTG
GACATGGAAGGAAGTTGAGTCAAGATTTCTCGGCATGAGAATCAGGAGAAGAATACCGTTCCCGGAAAACCAGGAGAAAT
GCACGGGCTGCAGGAAATGCGAGAGAATCTGCCCAACAAGATGTGTGAGGGTCGTGGAGGCTTAG

Upstream 100 bases:

>100_bases
ACGACTACCTTGCGGGAAGGCTTGCCGACACTTAGGCCAGTTTTTACAGTCTTTGTCAAAATCCCCTCCAATTTTTATTC
AGCTTTTCCCGGGAGAGCTC

Downstream 100 bases:

>100_bases
TTTTTCTGCCTCTTTTACCTTCTTAAGACGAATTAAATCAGCTCTTCAACTTTTTCAGCTCCTCCACGAACTCGTTGAAA
TCGTTGGCAATGCCCTCCGC

Product: ferredoxin (fdx-7)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKFRVEFDPRRCGAAGECVDVCKNGVWTWKEVESRFLGMRIRRRIPFPENQEKCTGCRKCERICPTRCVRVVEA

Sequences:

>Translated_74_residues
MKFRVEFDPRRCGAAGECVDVCKNGVWTWKEVESRFLGMRIRRRIPFPENQEKCTGCRKCERICPTRCVRVVEA
>Mature_74_residues
MKFRVEFDPRRCGAAGECVDVCKNGVWTWKEVESRFLGMRIRRRIPFPENQEKCTGCRKCERICPTRCVRVVEA

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8724; Mature: 8724

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
13.5 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
13.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRVEFDPRRCGAAGECVDVCKNGVWTWKEVESRFLGMRIRRRIPFPENQEKCTGCRKC
CCEECCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ERICPTRCVRVVEA
HHHCHHHHHHHHCC
>Mature Secondary Structure
MKFRVEFDPRRCGAAGECVDVCKNGVWTWKEVESRFLGMRIRRRIPFPENQEKCTGCRKC
CCEECCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ERICPTRCVRVVEA
HHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA