Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11498534

GI number: 11498534

Start: 828428

End: 829153

Strand: Reverse

Name: Not Available

Synonym: AF0929

Alternate gene names: 11498534

Gene position: 829153-828428 (Counterclockwise)

Preceding gene: 11498545

Following gene: 11498533

Centisome position: 38.06

GC content: 48.9

Gene sequence:

>726_bases
ATGGTCGTGCAGAACGGTATAAAGCTGTTGCTCCGGAAGGCTTTGAAAATCAATGCCGGGGAAAAAGTAATTTTTACTCC
CGTCCAACAAACTCTGATGAAACAGCTCATACTGGCTCTTGATGTGATGGATGGTGAAAAAGCGATGGAAATCGCCAAAA
AAGTTGCTGAACACGTTGACAGAATAAAGGTCAACTATCCTCTCGTTCTTTCTGCTGGCGTGGGGATAATGAAGCGACTT
TCCGAAATCAAACCCGTAATTGCGGATTTCAAGATTGCTGACGTCCCCTACACAAGCTCCCTCATCGCGAGAATTGCCTT
CGAGAACTCAGCCGAGTCGGTAATTGTCCACGGCTTTGTTGGCAGTGACACTCTTAGAGAGGTTTGCAGAGTGGCTGAGG
AGTTTGGGGGAAAGGTTTATGCCGTAACGGAGCTCAGCAGCCCCGGAGGGGAGGAGTTCATGAGTGCAGTTTCTCTGAAA
ATCGTTGAGAAGGCCAAAGAAGCAGGCTGTCACGGCCTCATCGCTCCGTCAACAAGAATTGAGAGGCTGAGGGAGATAAG
AAAAGCTGCGGGGGATATGGAGATACTCTGCCCGGGAATTGGGGCACAGAAAGGCAGCATCGAAGCTGTGAAGTATGCTG
ATGGAATTATAGTGGGGAGGGGAATTTATGCATCAGGTAATCCAGCAGAGGAAGCCAGAAAGCTCAGGAGAGTCCTCAAG
ATTTGA

Upstream 100 bases:

>100_bases
ACATCTTCAGTTTCAAGAGCTTTAATTTTTTTTAGCAACCTGTAGAGGGCTTCATCAACCCTTTCCCTCTTCCAGAACCC
CTTTTCCCTGACCATTATGC

Downstream 100 bases:

>100_bases
GCTAATTGCCTTCGACCTTGACGGAACTCTTATCGAGCTCAACATCCCCTTTGATGAGATAAGGAGAGAGCTTGGAATTG
AGGGGAGGTTCATCCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MVVQNGIKLLLRKALKINAGEKVIFTPVQQTLMKQLILALDVMDGEKAMEIAKKVAEHVDRIKVNYPLVLSAGVGIMKRL
SEIKPVIADFKIADVPYTSSLIARIAFENSAESVIVHGFVGSDTLREVCRVAEEFGGKVYAVTELSSPGGEEFMSAVSLK
IVEKAKEAGCHGLIAPSTRIERLREIRKAAGDMEILCPGIGAQKGSIEAVKYADGIIVGRGIYASGNPAEEARKLRRVLK
I

Sequences:

>Translated_241_residues
MVVQNGIKLLLRKALKINAGEKVIFTPVQQTLMKQLILALDVMDGEKAMEIAKKVAEHVDRIKVNYPLVLSAGVGIMKRL
SEIKPVIADFKIADVPYTSSLIARIAFENSAESVIVHGFVGSDTLREVCRVAEEFGGKVYAVTELSSPGGEEFMSAVSLK
IVEKAKEAGCHGLIAPSTRIERLREIRKAAGDMEILCPGIGAQKGSIEAVKYADGIIVGRGIYASGNPAEEARKLRRVLK
I
>Mature_241_residues
MVVQNGIKLLLRKALKINAGEKVIFTPVQQTLMKQLILALDVMDGEKAMEIAKKVAEHVDRIKVNYPLVLSAGVGIMKRL
SEIKPVIADFKIADVPYTSSLIARIAFENSAESVIVHGFVGSDTLREVCRVAEEFGGKVYAVTELSSPGGEEFMSAVSLK
IVEKAKEAGCHGLIAPSTRIERLREIRKAAGDMEILCPGIGAQKGSIEAVKYADGIIVGRGIYASGNPAEEARKLRRVLK
I

Specific function: Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) [H]

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR014732
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 26085; Mature: 26085

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQNGIKLLLRKALKINAGEKVIFTPVQQTLMKQLILALDVMDGEKAMEIAKKVAEHVD
CCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RIKVNYPLVLSAGVGIMKRLSEIKPVIADFKIADVPYTSSLIARIAFENSAESVIVHGFV
HEECCCCEEEECCHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHCCCCCEEEEEEEC
GSDTLREVCRVAEEFGGKVYAVTELSSPGGEEFMSAVSLKIVEKAKEAGCHGLIAPSTRI
CCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHH
ERLREIRKAAGDMEILCPGIGAQKGSIEAVKYADGIIVGRGIYASGNPAEEARKLRRVLK
HHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCEEEECCEECCCCCHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MVVQNGIKLLLRKALKINAGEKVIFTPVQQTLMKQLILALDVMDGEKAMEIAKKVAEHVD
CCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RIKVNYPLVLSAGVGIMKRLSEIKPVIADFKIADVPYTSSLIARIAFENSAESVIVHGFV
HEECCCCEEEECCHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHCCCCCEEEEEEEC
GSDTLREVCRVAEEFGGKVYAVTELSSPGGEEFMSAVSLKIVEKAKEAGCHGLIAPSTRI
CCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHH
ERLREIRKAAGDMEILCPGIGAQKGSIEAVKYADGIIVGRGIYASGNPAEEARKLRRVLK
HHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCEEEECCEECCCCCHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]