Click here to switch to the map view.

The map label for this gene is rps15p

Identifier: 11498407

GI number: 11498407

Start: 713116

End: 713574

Strand: Reverse

Name: rps15p

Synonym: AF0801

Alternate gene names: 11498407

Gene position: 713574-713116 (Counterclockwise)

Preceding gene: 11498411

Following gene: 11498406

Centisome position: 32.76

GC content: 48.8

Gene sequence:

>459_bases
ATGGCAAGAATTCATGCGCGAAGAAGGGGTAAATCAGGATCAAAGAGAATTTATCGCGACTCACCGCCGGAATGGGTGGA
CATGTCACCGGAGGAAGTGGAAAAGAAGGTTCTGGAGCTTTACAATGAAGGATACGAGCCGAGCATGATCGGAATGATTC
TCAGAGACCGCTACGGCATCCCGTCGGTAAAGCAGGTGACAGGGAAGAAGATTCAGAAAATCCTGAAGGAGCACGGTGTG
GAGATAAAGTATCCCGAAGACCTGAAAGCTCTGATAAAGAAGGCACTGAAGCTGAGAGCTCATCTGGAAGTCCACAGGAA
AGACAAGCACAACAGAAGAGGTCTGCAGCTGATCGAGGCGAAAATCTGGAGGCTTTCGAGCTACTACAAGGAGAAGGGAG
TGCTGCCGGCAGACTGGAAGTACAATCCGGATAGACTCAAAATTGAGATTTCGAAGTAA

Upstream 100 bases:

>100_bases
TATATAGTCTTTGCAAAGCAGTAGACGGTGAAGTTATACGAGTGCGTGAGACGCAAGTTATATATTCCAATCTCTGAAAG
AGGGCTGGGAGGTGACGATC

Downstream 100 bases:

>100_bases
CTGTTTTTAATCCCTCCACACTTTTAATTTCATGTTCTCAACTAGCGACGGAATTCTGACAGTGGAGGGTGTGAAGGTAA
CGGAGATTGTCAGGGAAACT

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGV
EIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKYNPDRLKIEISK

Sequences:

>Translated_152_residues
MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGV
EIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKYNPDRLKIEISK
>Mature_151_residues
ARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGVE
IKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKYNPDRLKIEISK

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family

Homologues:

Organism=Homo sapiens, GI4506685, Length=141, Percent_Identity=48.2269503546099, Blast_Score=128, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17554774, Length=141, Percent_Identity=43.9716312056738, Blast_Score=118, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320269, Length=141, Percent_Identity=43.2624113475177, Blast_Score=121, Evalue=6e-29,
Organism=Drosophila melanogaster, GI85724904, Length=141, Percent_Identity=44.6808510638298, Blast_Score=122, Evalue=8e-29,
Organism=Drosophila melanogaster, GI17136832, Length=141, Percent_Identity=44.6808510638298, Blast_Score=122, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS15_ARCFU (O29457)

Other databases:

- EMBL:   AE000782
- PIR:   A69350
- RefSeq:   NP_069635.1
- ProteinModelPortal:   O29457
- SMR:   O29457
- GeneID:   1484019
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0801
- NMPDR:   fig|224325.1.peg.794
- TIGR:   AF_0801
- HOGENOM:   HBG747651
- OMA:   IRRLVKY
- ProtClustDB:   PRK08561
- BioCyc:   AFUL224325:AF_0801-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01343_A
- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068
- Gene3D:   G3DSA:1.10.287.10

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind

EC number: NA

Molecular weight: Translated: 17960; Mature: 17829

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
PSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEA
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KIWRLSSYYKEKGVLPADWKYNPDRLKIEISK
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
ARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
PSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEA
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KIWRLSSYYKEKGVLPADWKYNPDRLKIEISK
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475