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Identifier: 11498352

GI number: 11498352

Start: 665728

End: 666477

Strand: Reverse

Name: Not Available

Synonym: AF0746

Alternate gene names: NA

Gene position: 666477-665728 (Counterclockwise)

Preceding gene: 11498353

Following gene: 11498350

Centisome position: 30.59

GC content: 50.0

Gene sequence:

>750_bases
ATGATATTTGAGAACCGCCTCGCTCTCTCTGCGATGGCCGGAGTGAACAATGCGGAGTTTTGCAGAAAGCAGAAAGCGTC
GCTTGTAATCCTAGGAGGGTTCAATGCTGACAGAAGGGCCCTTGAAGCGGCGGAAAAAGCCGTTAAGAGGGGTAGAAAGG
AGTTTCTGTTCGGGATTGACGGAATTGAAGGCGAGATAAAAAAGCTTGGGAGGAGGAAGTTTGCGGTAAACGTAAGGTCT
TCATCCCTTGAAGGCTACCTGAACGTTGCTGAACTGGTAGCGGAGTTTGAAGGCATAATTGAAATAAATGCTCACTGCAG
GCAGCCGGAGTTCGTTGAGATAGGCTGCGGGGAGTGGCTGCTCTTCAACCACGAGAGGCTGGTGGAAATCGTCAGCAAAA
CCTCAAGAATAGCACCCACATTCGTGAAAATAAGGGGAGGTCACAAATTGGATTACGAGAAGATCGCTCGAAAGCTCTTC
GATGCCGGCTGTCTGGCAATTCATGTCGATGCCATGATTCCGGGTGGTGGATGCGATTTTTCCCTGATTGAGAGAATTTC
AAGAATTGGGAATGTGATAGGAAACAACTCCTTCGTTGACATCGAGAGCGGGGAGAGAATCATAATGGCAGGGGCGAAGA
TGGCTTCGGCAGCCAGGGCTGTTTTGAGGGACGAAAACTTCTTCGAAAAAATGCTGAGAAGTCCCCTCCTTTCCCAGCCC
GTTGAGCTCAGCTGTGGGCGATTCCGATGA

Upstream 100 bases:

>100_bases
GGAGGTTTGCTCAAGATAGAGCTTACAGAGGATACTGCCTACATGACGGGTGGGGCGAGCAGAGTTTTCGACGGGATTTT
GAGGCTAAACGAGCTGAGAT

Downstream 100 bases:

>100_bases
GGTCGGAGATTGTGCAGTCTCTTGCCCTCGTAAAGGCTATCAGGCTCTCCTTCAGGCTGTAGAAAATTCTCCGGCTGTAG
TAAACCGCCGAGCCTATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MIFENRLALSAMAGVNNAEFCRKQKASLVILGGFNADRRALEAAEKAVKRGRKEFLFGIDGIEGEIKKLGRRKFAVNVRS
SSLEGYLNVAELVAEFEGIIEINAHCRQPEFVEIGCGEWLLFNHERLVEIVSKTSRIAPTFVKIRGGHKLDYEKIARKLF
DAGCLAIHVDAMIPGGGCDFSLIERISRIGNVIGNNSFVDIESGERIIMAGAKMASAARAVLRDENFFEKMLRSPLLSQP
VELSCGRFR

Sequences:

>Translated_249_residues
MIFENRLALSAMAGVNNAEFCRKQKASLVILGGFNADRRALEAAEKAVKRGRKEFLFGIDGIEGEIKKLGRRKFAVNVRS
SSLEGYLNVAELVAEFEGIIEINAHCRQPEFVEIGCGEWLLFNHERLVEIVSKTSRIAPTFVKIRGGHKLDYEKIARKLF
DAGCLAIHVDAMIPGGGCDFSLIERISRIGNVIGNNSFVDIESGERIIMAGAKMASAARAVLRDENFFEKMLRSPLLSQP
VELSCGRFR
>Mature_249_residues
MIFENRLALSAMAGVNNAEFCRKQKASLVILGGFNADRRALEAAEKAVKRGRKEFLFGIDGIEGEIKKLGRRKFAVNVRS
SSLEGYLNVAELVAEFEGIIEINAHCRQPEFVEIGCGEWLLFNHERLVEIVSKTSRIAPTFVKIRGGHKLDYEKIARKLF
DAGCLAIHVDAMIPGGGCDFSLIERISRIGNVIGNNSFVDIESGERIIMAGAKMASAARAVLRDENFFEKMLRSPLLSQP
VELSCGRFR

Specific function: Unknown

COG id: COG0042

COG function: function code J; tRNA-dihydrouridine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005270
- InterPro:   IPR001269 [H]

Pfam domain/function: PF01207 Dus [H]

EC number: NA

Molecular weight: Translated: 27620; Mature: 27620

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFENRLALSAMAGVNNAEFCRKQKASLVILGGFNADRRALEAAEKAVKRGRKEFLFGID
CCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHEECCC
GIEGEIKKLGRRKFAVNVRSSSLEGYLNVAELVAEFEGIIEINAHCRQPEFVEIGCGEWL
CCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCEEEECCCCEE
LFNHERLVEIVSKTSRIAPTFVKIRGGHKLDYEKIARKLFDAGCLAIHVDAMIPGGGCDF
EECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCH
SLIERISRIGNVIGNNSFVDIESGERIIMAGAKMASAARAVLRDENFFEKMLRSPLLSQP
HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHCHHHCCC
VELSCGRFR
CCCCCCCCC
>Mature Secondary Structure
MIFENRLALSAMAGVNNAEFCRKQKASLVILGGFNADRRALEAAEKAVKRGRKEFLFGID
CCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHEECCC
GIEGEIKKLGRRKFAVNVRSSSLEGYLNVAELVAEFEGIIEINAHCRQPEFVEIGCGEWL
CCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCEEEECCCCEE
LFNHERLVEIVSKTSRIAPTFVKIRGGHKLDYEKIARKLFDAGCLAIHVDAMIPGGGCDF
EECHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCH
SLIERISRIGNVIGNNSFVDIESGERIIMAGAKMASAARAVLRDENFFEKMLRSPLLSQP
HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHCHHHCCC
VELSCGRFR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]