Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11498298

GI number: 11498298

Start: 621785

End: 622543

Strand: Reverse

Name: Not Available

Synonym: AF0690

Alternate gene names: NA

Gene position: 622543-621785 (Counterclockwise)

Preceding gene: 11500019

Following gene: 11498295

Centisome position: 28.58

GC content: 47.17

Gene sequence:

>759_bases
ATGGACATTGCAATGGTTTACTCTGACAGATTGCTTTCTCCCCAGATTCCTCCCTCAAGAAAGCTCAGAGTTTTGAAGGA
GGTCGAAATAAGGCTTATTGAGGGTGAGGAGCAGGAAGTGGAAGAGCTAATCATGCAGATTCACTCTGAAGAGTATTTTA
GCAGAATTAGAAGTCACCCCTTCTTTGAAAATGCTGTTGAGAATGTGAAGTGCATACTTACTGGCCTTAAGGCGTTGAAG
GATTACGACGCTGTGATAGTTCCTGTTACCACCGCGGGACATCTGGCAGAGCAGAGCAGAATGAGGGGCTACTGCCTTCT
GAATGGTCTGGCAATAGCTGTTAAGGCGGCTGAAAGCTACGGACGAATTGCTGTTATTGAAACTGACGCCCACCACGGAA
AGGCCTCAATTGTTTCGGAGGAAAGAGCAACATTCTTCTGCATCGGCAGAAGGGAGTGTGAGATTTCCGAAGACCTTAGA
TGTGTTCTCGGAAGGAGGATGGGGAAGGATTACGTGAAGTCCTTCGAGGAGTTGGTAGAGAGAGTTAAGGAATACGACCC
AAATCTTGTCATCTGGTATCTCGGGCTTGATTTGGACAGCAGAGAGTATGCGGAAATGCCATTCGGGAGAGAGGAGTGGG
AAAAGCTGGTGAAGAACTTCATGAAAATGGCCGAAGGAAGAAAGAGCCTGATAATGCTTGCTTTAGGATTGAGGGATGAT
GTGCTGAAAGACATCGTTGGGTTGTTTGCGGGTTGGTAG

Upstream 100 bases:

>100_bases
CTTCATCAACCTCAGCACGCTTGCCTGAAGGAAGGAAAGTGATAATCGGCATGCTTAAAGACAAACTAAAAGTTATAAAT
CCCTTTTCCCAAAATTGTTT

Downstream 100 bases:

>100_bases
AGTTCAGCAATCAAGCTAAATCTGGTCAAGCAGCTTTCTTTTCTTCTCTTCGAATTCCTCTCTTGATATTACTCCACTTT
CATAAAGCTCCTTCAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDIAMVYSDRLLSPQIPPSRKLRVLKEVEIRLIEGEEQEVEELIMQIHSEEYFSRIRSHPFFENAVENVKCILTGLKALK
DYDAVIVPVTTAGHLAEQSRMRGYCLLNGLAIAVKAAESYGRIAVIETDAHHGKASIVSEERATFFCIGRRECEISEDLR
CVLGRRMGKDYVKSFEELVERVKEYDPNLVIWYLGLDLDSREYAEMPFGREEWEKLVKNFMKMAEGRKSLIMLALGLRDD
VLKDIVGLFAGW

Sequences:

>Translated_252_residues
MDIAMVYSDRLLSPQIPPSRKLRVLKEVEIRLIEGEEQEVEELIMQIHSEEYFSRIRSHPFFENAVENVKCILTGLKALK
DYDAVIVPVTTAGHLAEQSRMRGYCLLNGLAIAVKAAESYGRIAVIETDAHHGKASIVSEERATFFCIGRRECEISEDLR
CVLGRRMGKDYVKSFEELVERVKEYDPNLVIWYLGLDLDSREYAEMPFGREEWEKLVKNFMKMAEGRKSLIMLALGLRDD
VLKDIVGLFAGW
>Mature_252_residues
MDIAMVYSDRLLSPQIPPSRKLRVLKEVEIRLIEGEEQEVEELIMQIHSEEYFSRIRSHPFFENAVENVKCILTGLKALK
DYDAVIVPVTTAGHLAEQSRMRGYCLLNGLAIAVKAAESYGRIAVIETDAHHGKASIVSEERATFFCIGRRECEISEDLR
CVLGRRMGKDYVKSFEELVERVKEYDPNLVIWYLGLDLDSREYAEMPFGREEWEKLVKNFMKMAEGRKSLIMLALGLRDD
VLKDIVGLFAGW

Specific function: Unknown

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28923; Mature: 28923

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAMVYSDRLLSPQIPPSRKLRVLKEVEIRLIEGEEQEVEELIMQIHSEEYFSRIRSHP
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
FFENAVENVKCILTGLKALKDYDAVIVPVTTAGHLAEQSRMRGYCLLNGLAIAVKAAESY
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEHHHHHEEEEHHCC
GRIAVIETDAHHGKASIVSEERATFFCIGRRECEISEDLRCVLGRRMGKDYVKSFEELVE
CCEEEEEECCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
RVKEYDPNLVIWYLGLDLDSREYAEMPFGREEWEKLVKNFMKMAEGRKSLIMLALGLRDD
HHHHCCCCEEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHH
VLKDIVGLFAGW
HHHHHHHHHCCC
>Mature Secondary Structure
MDIAMVYSDRLLSPQIPPSRKLRVLKEVEIRLIEGEEQEVEELIMQIHSEEYFSRIRSHP
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
FFENAVENVKCILTGLKALKDYDAVIVPVTTAGHLAEQSRMRGYCLLNGLAIAVKAAESY
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEHHHHHEEEEHHCC
GRIAVIETDAHHGKASIVSEERATFFCIGRRECEISEDLRCVLGRRMGKDYVKSFEELVE
CCEEEEEECCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
RVKEYDPNLVIWYLGLDLDSREYAEMPFGREEWEKLVKNFMKMAEGRKSLIMLALGLRDD
HHHHCCCCEEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHH
VLKDIVGLFAGW
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA