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The map label for this gene is cooC-1

Identifier: 11497990

GI number: 11497990

Start: 342578

End: 343354

Strand: Reverse

Name: cooC-1

Synonym: AF0378

Alternate gene names: NA

Gene position: 343354-342578 (Counterclockwise)

Preceding gene: 11497991

Following gene: 11497989

Centisome position: 15.76

GC content: 48.01

Gene sequence:

>777_bases
ATGACAGTAATCGCGGTGGCAGGCAAGGGTGGGACCGGAAAAACGCTGGTTTCCGCCCTCCTCATTAATTTTATTTCAGA
GCACACTACAAGCGTTCTGGCAGTTGATGCCGACCCAGACAGCAACCTCCCAGAAGCTCTCGGTGTGGAGAAGCAGGTAA
GAAAAACTCTTGGCGAAATCAGGGAGCTCTTTCAGGTTAGCAGGGATGAAATGGGTTCAATGAACAAGGAGCAGTGGTTG
GAAGGCAAGATTTACGCTGAAGCAATATGCGAGTGCCCCAGATACGACCTTCTGGTGATGGGAAGGCCGGAAGGAGAGGG
GTGCTACTGCTTTGCCAATTCTCTGCTTCGAGGTGTGCTGAAGAGGCTGATGAGACACTACGAGTACATAATAATCGACA
CCGAAGCTGGTCTGGAGCACTTCAGCAGAAAAACCATCGACTCTGCTGATTACATAATAATCGTAACTGACATGTCGAGA
AAGGGACTGGCAACTGCAAAGAGGATCAAAGAGCTTGCCAGTGAGCTCAAGCTGAACTTCAAGAAGATTTTCCTGATTGC
CAACAGAATCGCTTCCGAGGATGCAGAGAAAACGATTAGAGAGTTTGCGAAAGAGGAGGGTTTGGAGCTTCTTGCCGTGC
TGCCCTACGACAGCAGTGTAGCAGAAATCGACCTTAGAGGAGAACCTGTAAGCAAGATAGACAAGAATTCTGAAGTCTAT
AGGAAAATGAAGGATGTAGCTAATTTAATGCTCAATTTGTCAGCCAAAGCGAGGTGA

Upstream 100 bases:

>100_bases
AAGAAGGGTGGGAAGTAATGGAGGAGGAAGTGAAGAAGGTTAAACTCATCCTTAAAGGAGCTCAGATTCATATCCCAGAG
CTGATAATAGAGGAAGAAGA

Downstream 100 bases:

>100_bases
TTAATTTGAAAAAGTTCACGCTTGAGGAGTTTTTGGATTTGCTGAAAAAGTATAATGTAGAGGAGATAGAAGGGGTGAAA
ATTGAGGGCGACCTCGAAAT

Product: CODH nickel-insertion accessory protein (cooC-1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTVIAVAGKGGTGKTLVSALLINFISEHTTSVLAVDADPDSNLPEALGVEKQVRKTLGEIRELFQVSRDEMGSMNKEQWL
EGKIYAEAICECPRYDLLVMGRPEGEGCYCFANSLLRGVLKRLMRHYEYIIIDTEAGLEHFSRKTIDSADYIIIVTDMSR
KGLATAKRIKELASELKLNFKKIFLIANRIASEDAEKTIREFAKEEGLELLAVLPYDSSVAEIDLRGEPVSKIDKNSEVY
RKMKDVANLMLNLSAKAR

Sequences:

>Translated_258_residues
MTVIAVAGKGGTGKTLVSALLINFISEHTTSVLAVDADPDSNLPEALGVEKQVRKTLGEIRELFQVSRDEMGSMNKEQWL
EGKIYAEAICECPRYDLLVMGRPEGEGCYCFANSLLRGVLKRLMRHYEYIIIDTEAGLEHFSRKTIDSADYIIIVTDMSR
KGLATAKRIKELASELKLNFKKIFLIANRIASEDAEKTIREFAKEEGLELLAVLPYDSSVAEIDLRGEPVSKIDKNSEVY
RKMKDVANLMLNLSAKAR
>Mature_257_residues
TVIAVAGKGGTGKTLVSALLINFISEHTTSVLAVDADPDSNLPEALGVEKQVRKTLGEIRELFQVSRDEMGSMNKEQWLE
GKIYAEAICECPRYDLLVMGRPEGEGCYCFANSLLRGVLKRLMRHYEYIIIDTEAGLEHFSRKTIDSADYIIIVTDMSRK
GLATAKRIKELASELKLNFKKIFLIANRIASEDAEKTIREFAKEEGLELLAVLPYDSSVAEIDLRGEPVSKIDKNSEVYR
KMKDVANLMLNLSAKAR

Specific function: Unknown

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0084 and MJ0823 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28838; Mature: 28707

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIAVAGKGGTGKTLVSALLINFISEHTTSVLAVDADPDSNLPEALGVEKQVRKTLGEI
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCHHHHHHHHHHHH
RELFQVSRDEMGSMNKEQWLEGKIYAEAICECPRYDLLVMGRPEGEGCYCFANSLLRGVL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
KRLMRHYEYIIIDTEAGLEHFSRKTIDSADYIIIVTDMSRKGLATAKRIKELASELKLNF
HHHHHHCEEEEEECHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KKIFLIANRIASEDAEKTIREFAKEEGLELLAVLPYDSSVAEIDLRGEPVSKIDKNSEVY
HHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCHHHHCCCHHHH
RKMKDVANLMLNLSAKAR
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TVIAVAGKGGTGKTLVSALLINFISEHTTSVLAVDADPDSNLPEALGVEKQVRKTLGEI
EEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCHHHHHHHHHHHH
RELFQVSRDEMGSMNKEQWLEGKIYAEAICECPRYDLLVMGRPEGEGCYCFANSLLRGVL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
KRLMRHYEYIIIDTEAGLEHFSRKTIDSADYIIIVTDMSRKGLATAKRIKELASELKLNF
HHHHHHCEEEEEECHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KKIFLIANRIASEDAEKTIREFAKEEGLELLAVLPYDSSVAEIDLRGEPVSKIDKNSEVY
HHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCHHHHCCCHHHH
RKMKDVANLMLNLSAKAR
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]