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Identifier: 11497954

GI number: 11497954

Start: 313595

End: 314047

Strand: Reverse

Name: Not Available

Synonym: AF0342

Alternate gene names: NA

Gene position: 314047-313595 (Counterclockwise)

Preceding gene: 11497955

Following gene: 11497953

Centisome position: 14.42

GC content: 50.77

Gene sequence:

>453_bases
ATGTATGAGGATGTTGTTGGGAGGGAGCTTGAGCGTTACGGCCTTTTTTCGGCTTATGCAAAGATGGCCAAGGACGAGAG
GATAAAGAAGCTCTACCAGTCCCTCGCAAGGGCGGAGGAGATTGCACTGATTTCCCTTCTCCGAAACCTGGGAAAAGACC
CCTACAGGGATGCAGTGGAAATGGGGGAGAGGCTTGAGGATGAGGCAAGGTTCATGGAGGAGAAGATGAAGGAAGCTTTG
GCCGAGAAAAACAGGAAGGTTGCAACGAATCTGAGATTCCTCGCGGTAATCAAGAAGAACATGTCCGAAATGCTGGAGTT
TCCAGAGGACTTCAAAGCGATATACGTATGCCCCATGTGCGGATACATTGTCAAGGACGAAACGCCCGACGTTTGCCCGC
TGTGCAACGCTCCTGGAGAGAGCTTTGAGAAGTTTGAGGTGATTGGAGAGTGA

Upstream 100 bases:

>100_bases
GAGGTCAGACAGGCAAATGGTTCGAATTTCGTAAATTTGGATTTTTCAAAATCCAGAAAAATTTCGAAAGACTTAAGTTA
GAGTTTGGCCAAGTTAAGTT

Downstream 100 bases:

>100_bases
AGAGGTGGAGATGTAAGCTCTGCGGGCTTGTTTTCAGAGGGGATGAGCCGCCTGAAGTTTGCGGAAGGTGCGGTGCGACT
AAGGAGCAGTTTGAGGAGAT

Product: nigerythrin, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MYEDVVGRELERYGLFSAYAKMAKDERIKKLYQSLARAEEIALISLLRNLGKDPYRDAVEMGERLEDEARFMEEKMKEAL
AEKNRKVATNLRFLAVIKKNMSEMLEFPEDFKAIYVCPMCGYIVKDETPDVCPLCNAPGESFEKFEVIGE

Sequences:

>Translated_150_residues
MYEDVVGRELERYGLFSAYAKMAKDERIKKLYQSLARAEEIALISLLRNLGKDPYRDAVEMGERLEDEARFMEEKMKEAL
AEKNRKVATNLRFLAVIKKNMSEMLEFPEDFKAIYVCPMCGYIVKDETPDVCPLCNAPGESFEKFEVIGE
>Mature_150_residues
MYEDVVGRELERYGLFSAYAKMAKDERIKKLYQSLARAEEIALISLLRNLGKDPYRDAVEMGERLEDEARFMEEKMKEAL
AEKNRKVATNLRFLAVIKKNMSEMLEFPEDFKAIYVCPMCGYIVKDETPDVCPLCNAPGESFEKFEVIGE

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17352; Mature: 17352

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEDVVGRELERYGLFSAYAKMAKDERIKKLYQSLARAEEIALISLLRNLGKDPYRDAVE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MGERLEDEARFMEEKMKEALAEKNRKVATNLRFLAVIKKNMSEMLEFPEDFKAIYVCPMC
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH
GYIVKDETPDVCPLCNAPGESFEKFEVIGE
CCHHCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MYEDVVGRELERYGLFSAYAKMAKDERIKKLYQSLARAEEIALISLLRNLGKDPYRDAVE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MGERLEDEARFMEEKMKEALAEKNRKVATNLRFLAVIKKNMSEMLEFPEDFKAIYVCPMC
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH
GYIVKDETPDVCPLCNAPGESFEKFEVIGE
CCHHCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA