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The map label for this gene is trkA-1

Identifier: 11497834

GI number: 11497834

Start: 194412

End: 195581

Strand: Reverse

Name: trkA-1

Synonym: AF0218

Alternate gene names: NA

Gene position: 195581-194412 (Counterclockwise)

Preceding gene: 11497835

Following gene: 11497833

Centisome position: 8.98

GC content: 48.29

Gene sequence:

>1170_bases
ATGTACATTGTCGTATCAACCGGAGACAGAGCAGCAAGGATAGCCTCAAAGCTACCAGACTGCATAATCATAGACAGAGA
CCCTGACTCAGCCGAGAGGCTGAAGGAAAAGGGATTCAACGTTTTAAACGGGGACGCCTCCAATCCTGAAATTCTCGCGA
GATTTGACATGGGAGAGAAAATAATTCTTGCAGACAACGACGATTTCAACATTAAGGTTGTAAAAACCGCCAAGCTGCTG
GGACTTGACGTTTATGCTGTTGCCGCAGATGAAGACAAGTGCTGGCTTTACGAGGTTGAAGGAGTATCAAAAATTTGCGG
CTCGGTTGAAGCTCTGCTGTCAACCATTTTCAGGAAGAACAGGTACTTTGAGATACAAGTTGAGGCTGAAATGGAGGGAA
AGACGCTGAAAGAATACGATGCTGGCGAGGATTGCATGGTCATCTCCGTTTTCCGTGATGGAAAAGTCTTACAGCCATTC
CCGGACCTTGAGCTGAAGGCGGGAGATTTGCTGGGGCTTGTATGCGGCGAGCAGGTGAGAACCACAAAAAATCCCTTCGA
CAACATTCTGCTGCTCAAAGGAGACATGGGTGAAGGGGAAATCAGAGAGGCTGAGATGGTAGCCAAGAAGTTCGGAGCGA
ACCTGATTACCTTTGAAAAAGTCGGTGGCGCTTACGCCTGCGCTCTTGAAGGCTATGGTGAGAGCGTAGAGCTTGAGGAG
GCTATCAACATCCTTAAAAAGAGCGACGAGCTTGACCTGATCGCTACGACCTTGACCGAGAAGAACAAAGAAATTCTGAA
AAAGCTTGTTTCAAGCTTTCCAACTCTGGTTTTGTCGGGAAGGGATGACTACAGGAGAATTCTCGCTCTTGTTAACACCT
CCAACCCGGACACGATAATCAGCATGGCCAAGGCCTTCTCGAGGTTTTTTGGCAAAGCGAAGGCCCTTTTCCTCGACGAG
GAGCAGATAAAGCACTTCTCCAAGTTTACGGAAACGGACCTCGAAGTGGAGGTCTCAAGGGGAAACCCCATGGTTGATGC
GGTAAAGGAGTTCAAGAGCGGTTACGACCTCGTCATTCTCTCCCTCTCCAATGACATCGGGAACATTGACAGAGACATTC
TCTGGAAAATAATTCTCGACAAGGAGTCTTCCGTTCTGGTGGTAGAGTGA

Upstream 100 bases:

>100_bases
TCACATCCAGAGGAGCGGCACAGGACATAGTGATGGCCTCAATCGATGCGGTCATCAATGCAGTTAACTACCTCCTGAGG
ATGAAGAGGAGAAAGAGCTG

Downstream 100 bases:

>100_bases
GTGAGGTAGAGCAGTTCGCCACCATCGCTTTAATCTCCCTAACCGCCTTCATTTCCCCTTTAATCGCAGACAAGCTAAGG
GTTCCGGTAGTTGTTCTTGA

Product: TRK potassium uptake system protein (trkA-1)

Products: NA

Alternate protein names: TrkA-N Domain Protein; TRK Potassium Uptake System Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MYIVVSTGDRAARIASKLPDCIIIDRDPDSAERLKEKGFNVLNGDASNPEILARFDMGEKIILADNDDFNIKVVKTAKLL
GLDVYAVAADEDKCWLYEVEGVSKICGSVEALLSTIFRKNRYFEIQVEAEMEGKTLKEYDAGEDCMVISVFRDGKVLQPF
PDLELKAGDLLGLVCGEQVRTTKNPFDNILLLKGDMGEGEIREAEMVAKKFGANLITFEKVGGAYACALEGYGESVELEE
AINILKKSDELDLIATTLTEKNKEILKKLVSSFPTLVLSGRDDYRRILALVNTSNPDTIISMAKAFSRFFGKAKALFLDE
EQIKHFSKFTETDLEVEVSRGNPMVDAVKEFKSGYDLVILSLSNDIGNIDRDILWKIILDKESSVLVVE

Sequences:

>Translated_389_residues
MYIVVSTGDRAARIASKLPDCIIIDRDPDSAERLKEKGFNVLNGDASNPEILARFDMGEKIILADNDDFNIKVVKTAKLL
GLDVYAVAADEDKCWLYEVEGVSKICGSVEALLSTIFRKNRYFEIQVEAEMEGKTLKEYDAGEDCMVISVFRDGKVLQPF
PDLELKAGDLLGLVCGEQVRTTKNPFDNILLLKGDMGEGEIREAEMVAKKFGANLITFEKVGGAYACALEGYGESVELEE
AINILKKSDELDLIATTLTEKNKEILKKLVSSFPTLVLSGRDDYRRILALVNTSNPDTIISMAKAFSRFFGKAKALFLDE
EQIKHFSKFTETDLEVEVSRGNPMVDAVKEFKSGYDLVILSLSNDIGNIDRDILWKIILDKESSVLVVE
>Mature_389_residues
MYIVVSTGDRAARIASKLPDCIIIDRDPDSAERLKEKGFNVLNGDASNPEILARFDMGEKIILADNDDFNIKVVKTAKLL
GLDVYAVAADEDKCWLYEVEGVSKICGSVEALLSTIFRKNRYFEIQVEAEMEGKTLKEYDAGEDCMVISVFRDGKVLQPF
PDLELKAGDLLGLVCGEQVRTTKNPFDNILLLKGDMGEGEIREAEMVAKKFGANLITFEKVGGAYACALEGYGESVELEE
AINILKKSDELDLIATTLTEKNKEILKKLVSSFPTLVLSGRDDYRRILALVNTSNPDTIISMAKAFSRFFGKAKALFLDE
EQIKHFSKFTETDLEVEVSRGNPMVDAVKEFKSGYDLVILSLSNDIGNIDRDILWKIILDKESSVLVVE

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43257; Mature: 43257

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVVSTGDRAARIASKLPDCIIIDRDPDSAERLKEKGFNVLNGDASNPEILARFDMGEK
CEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHCCCEEECCCCCCCCEEEEECCCCE
IILADNDDFNIKVVKTAKLLGLDVYAVAADEDKCWLYEVEGVSKICGSVEALLSTIFRKN
EEEECCCCCEEEEEEEEEEECEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
RYFEIQVEAEMEGKTLKEYDAGEDCMVISVFRDGKVLQPFPDLELKAGDLLGLVCGEQVR
CEEEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCEECCCCCCEECCCCEEEECCCCHHH
TTKNPFDNILLLKGDMGEGEIREAEMVAKKFGANLITFEKVGGAYACALEGYGESVELEE
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCEEHHH
AINILKKSDELDLIATTLTEKNKEILKKLVSSFPTLVLSGRDDYRRILALVNTSNPDTII
HHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCCCHHHH
SMAKAFSRFFGKAKALFLDEEQIKHFSKFTETDLEVEVSRGNPMVDAVKEFKSGYDLVIL
HHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEE
SLSNDIGNIDRDILWKIILDKESSVLVVE
EECCCCCCCCHHEEEEEEECCCCCEEEEC
>Mature Secondary Structure
MYIVVSTGDRAARIASKLPDCIIIDRDPDSAERLKEKGFNVLNGDASNPEILARFDMGEK
CEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHCCCEEECCCCCCCCEEEEECCCCE
IILADNDDFNIKVVKTAKLLGLDVYAVAADEDKCWLYEVEGVSKICGSVEALLSTIFRKN
EEEECCCCCEEEEEEEEEEECEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
RYFEIQVEAEMEGKTLKEYDAGEDCMVISVFRDGKVLQPFPDLELKAGDLLGLVCGEQVR
CEEEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCEECCCCCCEECCCCEEEECCCCHHH
TTKNPFDNILLLKGDMGEGEIREAEMVAKKFGANLITFEKVGGAYACALEGYGESVELEE
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCEEHHH
AINILKKSDELDLIATTLTEKNKEILKKLVSSFPTLVLSGRDDYRRILALVNTSNPDTII
HHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCCCHHHH
SMAKAFSRFFGKAKALFLDEEQIKHFSKFTETDLEVEVSRGNPMVDAVKEFKSGYDLVIL
HHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEE
SLSNDIGNIDRDILWKIILDKESSVLVVE
EECCCCCCCCHHEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA