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Identifier: 11497829

GI number: 11497829

Start: 189412

End: 190191

Strand: Reverse

Name: Not Available

Synonym: AF0213

Alternate gene names: NA

Gene position: 190191-189412 (Counterclockwise)

Preceding gene: 11497833

Following gene: 11497828

Centisome position: 8.73

GC content: 47.95

Gene sequence:

>780_bases
ATGGCGCACGCATGTCTCATTGAAATCAAAAAAGTTTATAATTTTGTTGTTACCTTCGTAGTAACAATGGATGAAATAAT
AGAGGTTCTGAAAAGGCTCGGATTCAGGGATTACGAGGCGAGAGTTTACGCAACCCTCGCCACGAGGGGTGAGGCTACGG
CAAGCGAAATTCACAGAGTCAGCGGAGTCCCGCGGAACAAAGTTTACGAAGTTCTCAGGTCGCTTGAAGACAGGGGGATG
ATTGAGACGATAAAAAGCTCCCCAGCCGTTTTCAGGGCGATAGACCCTGAAAGCGTTCTTGAGGAATACAAGGAGCAGCT
TGTCAGCGCCGTCGATACAGCCATCAGAAGCATAAGGGAGTCCGAGGACTTCTCAACCCTTCACCCCGTGTGGTGTGTCA
GAGGTCTTGCAGGAATAAAGAACAGAGCAAAGGCCATGCTCCAGAGAAGTGAAGAGGTTTTTGTCATCACCGCCAAGAGA
GTGTACCTCGACATGATTCTAAAAATCAAGAGTCCTGAGGATATTACGGTCGTTACCGATAACGCTGAAAAATTTTCAGA
CCTGAGCGTAAAAACCCTTGAGCTGAAAAAGGAGTTTTCAGGCATTTTCAACGATGCTGTCATTGATGGGGTCCGATACC
GCTTTGAGCTCCTCCTCATCTCAGGCTACGAGTCCTTCGGCGTTTACAGAGCTGGAGACGAGCTTCTTGGCGTGAGCATA
AGCCTTCCGATAATCATACTCTTTCAGAGGATGATCTTCCTCGGACTTCTGGCAAAGTGA

Upstream 100 bases:

>100_bases
ACATTGCTTCCGGCAACGCTTGCGTGAAAATCGATACTTGCTGAAATTTCTTGGGCCACCGCGGGATAGATGAGAAGGAA
CGCGACGGCTGTCGCGAGTA

Downstream 100 bases:

>100_bases
TTTATTCCACCCGCCTACTTAAAGCATGGAGGAAATTCTGAGGCTCAGAAGGAGTGTCAGCATTGACGATTACATTGAAA
AGGTAAAGCCAATCGTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; TrmB Family Transcriptional Regulator; Sugar-Specific Transcriptional Regulator; Transcription Regulator Helix-Turn-Helix Family; Sugar-Specific Transcriptional Regulator TrmB Family; Transcription Regulator

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAHACLIEIKKVYNFVVTFVVTMDEIIEVLKRLGFRDYEARVYATLATRGEATASEIHRVSGVPRNKVYEVLRSLEDRGM
IETIKSSPAVFRAIDPESVLEEYKEQLVSAVDTAIRSIRESEDFSTLHPVWCVRGLAGIKNRAKAMLQRSEEVFVITAKR
VYLDMILKIKSPEDITVVTDNAEKFSDLSVKTLELKKEFSGIFNDAVIDGVRYRFELLLISGYESFGVYRAGDELLGVSI
SLPIIILFQRMIFLGLLAK

Sequences:

>Translated_259_residues
MAHACLIEIKKVYNFVVTFVVTMDEIIEVLKRLGFRDYEARVYATLATRGEATASEIHRVSGVPRNKVYEVLRSLEDRGM
IETIKSSPAVFRAIDPESVLEEYKEQLVSAVDTAIRSIRESEDFSTLHPVWCVRGLAGIKNRAKAMLQRSEEVFVITAKR
VYLDMILKIKSPEDITVVTDNAEKFSDLSVKTLELKKEFSGIFNDAVIDGVRYRFELLLISGYESFGVYRAGDELLGVSI
SLPIIILFQRMIFLGLLAK
>Mature_258_residues
AHACLIEIKKVYNFVVTFVVTMDEIIEVLKRLGFRDYEARVYATLATRGEATASEIHRVSGVPRNKVYEVLRSLEDRGMI
ETIKSSPAVFRAIDPESVLEEYKEQLVSAVDTAIRSIRESEDFSTLHPVWCVRGLAGIKNRAKAMLQRSEEVFVITAKRV
YLDMILKIKSPEDITVVTDNAEKFSDLSVKTLELKKEFSGIFNDAVIDGVRYRFELLLISGYESFGVYRAGDELLGVSIS
LPIIILFQRMIFLGLLAK

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29324; Mature: 29192

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHACLIEIKKVYNFVVTFVVTMDEIIEVLKRLGFRDYEARVYATLATRGEATASEIHRV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHHH
SGVPRNKVYEVLRSLEDRGMIETIKSSPAVFRAIDPESVLEEYKEQLVSAVDTAIRSIRE
CCCCHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
SEDFSTLHPVWCVRGLAGIKNRAKAMLQRSEEVFVITAKRVYLDMILKIKSPEDITVVTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEC
NAEKFSDLSVKTLELKKEFSGIFNDAVIDGVRYRFELLLISGYESFGVYRAGDELLGVSI
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHCCEEECCCHHEEEEH
SLPIIILFQRMIFLGLLAK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHACLIEIKKVYNFVVTFVVTMDEIIEVLKRLGFRDYEARVYATLATRGEATASEIHRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHHH
SGVPRNKVYEVLRSLEDRGMIETIKSSPAVFRAIDPESVLEEYKEQLVSAVDTAIRSIRE
CCCCHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
SEDFSTLHPVWCVRGLAGIKNRAKAMLQRSEEVFVITAKRVYLDMILKIKSPEDITVVTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEC
NAEKFSDLSVKTLELKKEFSGIFNDAVIDGVRYRFELLLISGYESFGVYRAGDELLGVSI
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHCCEEECCCHHEEEEH
SLPIIILFQRMIFLGLLAK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA