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The map label for this gene is ubiA

Identifier: 15679797

GI number: 15679797

Start: 1652270

End: 1653136

Strand: Direct

Name: ubiA

Synonym: MTH1809

Alternate gene names: NA

Gene position: 1652270-1653136 (Clockwise)

Preceding gene: 15679796

Following gene: 15679801

Centisome position: 94.34

GC content: 46.25

Gene sequence:

>867_bases
ATGAATGTTCTTGGAGACTATGCGAGATTTCTCTTCAGGATATCCAGGTTCAGGTTCTGGATCTACACAGGCGGAACCTA
TGTGATAGGATACACCCTGGCCGCGTCAGGATTTGCAGATTTCCTCTCACCTGCCTACTACCTCTACCTGATATACTTTT
TCTTTCCGGCCAGTATCTTCATATACGGGGTTAATGACTGGTGGGATGAGGAAACCGACATTCTGAACCCCAAGAAGGGC
TCCAGAGAACATATGCTGGCCCAGGATGAGAGAAAAAGATTGAAGAGATCGATAATACTAGTAACCGTCATCAGCTTCCT
TATGATGCTATCACAGACACTTACGGAGGCCCTAATTTTCATGGGATTCCTTTTTTTATCATACTTCTACAGCGCACCCC
CACTTCGCTTCAAGGAGAGACCCTTCCTGGATTTCTCATCCAACTACCTCTATATAATGCCGGGAATATTCGCATACAAC
CTTGCATCGGGCGCCCTTCCGGACCCGCTGATCCTCTTTGCCGGTTACTGCCATGTTGCAGCCATGCACATCTTCTCGGC
CGTACCTGATACTGAATATGACAGAATTGCAGGTATAAACACCACCCCCGTTTTCATCGGCAGAAGACCGGCCCTTGCAC
TTTCAGCCTTCTTCTGGTTACTGCTATCCATTATAACAGTATTCGTTACAGGATTCCATCCACTGAGCTTCCTGGTATTC
ATATACCCGGCATTTCCCCTTTCAGTGCTTCTAATAAGGAGAATAAGAATAGAGAAGATATACTGGTATTTACCCCATGT
TAACACTGCCCTCGGCGGCCTTCTATTCCTTGCACTCATAAACTACAGGGTGTTTCACTGGATATAA

Upstream 100 bases:

>100_bases
TCAGGGGGCCGTGTGGTATCCGGGGCGGTATTTAACATGTTCCGCCTCATGGGTCCTCTCAGGGTCAGCAGAGGTCCATG
ACCTTCGGGGCAGTGTTCAG

Downstream 100 bases:

>100_bases
CCCAACGGGATACTTCACCATAATTTAAACCTGGGTGTTCTTAATATGAGTGCAATGAGCATGAGGCCTGCAATGAAGGG
TATCTCAAGGCCAAGGAAGA

Product: prenyltransferase

Products: NA

Alternate protein names: UbiA Prenyltransferase; Lycopene Elongase

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNVLGDYARFLFRISRFRFWIYTGGTYVIGYTLAASGFADFLSPAYYLYLIYFFFPASIFIYGVNDWWDEETDILNPKKG
SREHMLAQDERKRLKRSIILVTVISFLMMLSQTLTEALIFMGFLFLSYFYSAPPLRFKERPFLDFSSNYLYIMPGIFAYN
LASGALPDPLILFAGYCHVAAMHIFSAVPDTEYDRIAGINTTPVFIGRRPALALSAFFWLLLSIITVFVTGFHPLSFLVF
IYPAFPLSVLLIRRIRIEKIYWYLPHVNTALGGLLFLALINYRVFHWI

Sequences:

>Translated_288_residues
MNVLGDYARFLFRISRFRFWIYTGGTYVIGYTLAASGFADFLSPAYYLYLIYFFFPASIFIYGVNDWWDEETDILNPKKG
SREHMLAQDERKRLKRSIILVTVISFLMMLSQTLTEALIFMGFLFLSYFYSAPPLRFKERPFLDFSSNYLYIMPGIFAYN
LASGALPDPLILFAGYCHVAAMHIFSAVPDTEYDRIAGINTTPVFIGRRPALALSAFFWLLLSIITVFVTGFHPLSFLVF
IYPAFPLSVLLIRRIRIEKIYWYLPHVNTALGGLLFLALINYRVFHWI
>Mature_288_residues
MNVLGDYARFLFRISRFRFWIYTGGTYVIGYTLAASGFADFLSPAYYLYLIYFFFPASIFIYGVNDWWDEETDILNPKKG
SREHMLAQDERKRLKRSIILVTVISFLMMLSQTLTEALIFMGFLFLSYFYSAPPLRFKERPFLDFSSNYLYIMPGIFAYN
LASGALPDPLILFAGYCHVAAMHIFSAVPDTEYDRIAGINTTPVFIGRRPALALSAFFWLLLSIITVFVTGFHPLSFLVF
IYPAFPLSVLLIRRIRIEKIYWYLPHVNTALGGLLFLALINYRVFHWI

Specific function: Unknown

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33423; Mature: 33423

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLGDYARFLFRISRFRFWIYTGGTYVIGYTLAASGFADFLSPAYYLYLIYFFFPASIF
CCCHHHHHHHHHHHHHHEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IYGVNDWWDEETDILNPKKGSREHMLAQDERKRLKRSIILVTVISFLMMLSQTLTEALIF
EEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFLFLSYFYSAPPLRFKERPFLDFSSNYLYIMPGIFAYNLASGALPDPLILFAGYCHVA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHH
AMHIFSAVPDTEYDRIAGINTTPVFIGRRPALALSAFFWLLLSIITVFVTGFHPLSFLVF
HHHHHHHCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IYPAFPLSVLLIRRIRIEKIYWYLPHVNTALGGLLFLALINYRVFHWI
HHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVLGDYARFLFRISRFRFWIYTGGTYVIGYTLAASGFADFLSPAYYLYLIYFFFPASIF
CCCHHHHHHHHHHHHHHEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IYGVNDWWDEETDILNPKKGSREHMLAQDERKRLKRSIILVTVISFLMMLSQTLTEALIF
EEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFLFLSYFYSAPPLRFKERPFLDFSSNYLYIMPGIFAYNLASGALPDPLILFAGYCHVA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHH
AMHIFSAVPDTEYDRIAGINTTPVFIGRRPALALSAFFWLLLSIITVFVTGFHPLSFLVF
HHHHHHHCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IYPAFPLSVLLIRRIRIEKIYWYLPHVNTALGGLLFLALINYRVFHWI
HHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA