| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679678
GI number: 15679678
Start: 1542813
End: 1544108
Strand: Direct
Name: Not Available
Synonym: MTH1684
Alternate gene names: NA
Gene position: 1542813-1544108 (Clockwise)
Preceding gene: 15679677
Following gene: 15679679
Centisome position: 88.09
GC content: 53.09
Gene sequence:
>1296_bases ATGTCATTGTGGCCGAACCGTTCGAGGAACTGGCGGGTTCACTGTGACTGCAGGGGGTTTAATTTGGACAGGCACGTCTC TGAGATAAACGAGAGAATACTTGAAGGGGATGCAGCTGTCTTCACAGCAGATGAGATAAAGGACATGGTCCGTGATGGTG ACGTCCCATCAGCTGATGAGGTTGACGTGGTAACCACAGCCACCTGTGGTGTCATGTCAGGCACAGCAGCGGTCATGCAC CTTAGAGTGTCAGAGCCGGGCTCCTTCCGCAAGGCAGCCAGTGTTGAGCTGAACGGAATACCTGCCTATCCTGGCCCATG CCCAAATGAGAACCTCGGGTCGGTCGACCTCTTCATCTACGGGACCGGTCACAGCAGGGAGGACCCTGACTATGGGGGAG GTTTTCTGTTCAGGGACCTACTCCTGGGATCTGAGGTCGAGGTCAGGGTCACGTCTGTGGAGGGCAGGGTGGTTGAGTCA ACGGTCACCATGGATGATATTGAAACAGCCAGGATAGTTGGTACACGCATGGCCTTCAGGAATTACACAGCCCTTGTCAA TCCAGGAGAAACACCAGTGAAATCCATATTCAATGCATTTGAAATGCCAGAAAATTGCGGCGGTCTTTCCTTCTCTGGCT GCGGTGACATCAACCCCCTTGAAAACGATCCATCAATGGAGACCGTCCATCAGGGTACCGGGGTGCTTCTGAACGGGGCC AGGGCCATAGTACTGGGAGAGGGTACAAGGAGTAGCCCCATAAAGCCGAACCTCATGCTCAGCGGCGACCTCCACGACAT GAAACCCCGTTACATCGGAGGATTCCGGACAGCAGCAGGTCCAGAGATATTTAACACAGTGGCGGTTCCAGTACCGGTAA CATCAGAAAGGGTTCTTGAGAACCTCATGGTACTTAATTCAGATATAAAACTTCCTGTTGCTGATGTAAGGGATCGTTCA AGGGTTATAACTGAGATAACCTATGAGGATGTTTGGAGTGGTGACGTGAGACCTGTCCACCACCCAGAGAGGTGCACAGA CTGCGCGGTCTGCCTTGCAGCCAGGAGGTGCCCCACACATGCCATCGATAACGGCCTGGACCTTGACAGGTGTTTCGGCT GTGGAGTATGCGCATGGTCCTGTCCTTCAGGAGCATATGAGATGGATACCGGGACAGTCAGGATAGGTGAACTGGCAGTG CCCATCATATGCAGACAGTCAGACAGGTTAAGGGCCCGCGAACTATCCCTGGAACTCAAAAAGCTCATAGAAAACGGGGA TTTCCTCATGGGATGA
Upstream 100 bases:
>100_bases GAGGCAGACCTCACCTTGCACAGGGAGCAGGGCCCGCGACCGATAAAGTGGATGAGGCCCTTGAGGAGGCGAGAGCTGCA CTCAGTACTGTGAGGAACTG
Downstream 100 bases:
>100_bases GCGAATGGTTTTGGATGAGGTATAGATGATGGGGGTGTTATGATTCTTGATTATGATGTTATACTTGCACGCTACGGTGA GGTCGCCATCAAGGGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADEVDVVTTATCGVMSGTAAVMH LRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIYGTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVES TVTMDDIETARIVGTRMAFRNYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLENLMVLNSDIKLPVADVRDRS RVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTHAIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAV PIICRQSDRLRARELSLELKKLIENGDFLMG
Sequences:
>Translated_431_residues MSLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADEVDVVTTATCGVMSGTAAVMH LRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIYGTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVES TVTMDDIETARIVGTRMAFRNYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLENLMVLNSDIKLPVADVRDRS RVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTHAIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAV PIICRQSDRLRARELSLELKKLIENGDFLMG >Mature_430_residues SLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADEVDVVTTATCGVMSGTAAVMHL RVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIYGTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVEST VTMDDIETARIVGTRMAFRNYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGAR AIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLENLMVLNSDIKLPVADVRDRSR VITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTHAIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAVP IICRQSDRLRARELSLELKKLIENGDFLMG
Specific function: Unknown
COG id: COG1900
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1684_METTH (O27719)
Other databases:
- EMBL: AE000666 - PIR: B69092 - RefSeq: NP_276795.1 - ProteinModelPortal: O27719 - SMR: O27719 - STRING: O27719 - GeneID: 1470769 - GenomeReviews: AE000666_GR - KEGG: mth:MTH1684 - NMPDR: fig|187420.1.peg.1650 - eggNOG: arNOG04915 - HOGENOM: HBG539015 - OMA: PGPCPNE - ProtClustDB: CLSK876664 - BioCyc: MTHE187420:MTH1684-MONOMER - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002708 - InterPro: IPR017677 - ProDom: PD011569 - TIGRFAMs: TIGR03287
Pfam domain/function: PF01837 DUF39
EC number: NA
Molecular weight: Translated: 46951; Mature: 46820
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADE CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCC VDVVTTATCGVMSGTAAVMHLRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIY EEEEEEECCCHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE GTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVESTVTMDDIETARIVGTRMAFR ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEEEEEHHHCCHHHHHHHHHHHH NYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA CCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECC RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLE EEEEEECCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCHHHCEEEECCCCCHHHHHH NLMVLNSDIKLPVADVRDRSRVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTH HHHHHCCCCCCCHHHHCCCHHEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCH AIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAVPIICRQSDRLRARELSLELK HHCCCCCHHHHHCCCEEEECCCCCCEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHHH KLIENGDFLMG HHHCCCCCCCC >Mature Secondary Structure SLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADE CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCC VDVVTTATCGVMSGTAAVMHLRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIY EEEEEEECCCHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE GTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVESTVTMDDIETARIVGTRMAFR ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEEEEEHHHCCHHHHHHHHHHHH NYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA CCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECC RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLE EEEEEECCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCHHHCEEEECCCCCHHHHHH NLMVLNSDIKLPVADVRDRSRVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTH HHHHHCCCCCCCHHHHCCCHHEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCH AIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAVPIICRQSDRLRARELSLELK HHCCCCCHHHHHCCCEEEECCCCCCEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHHH KLIENGDFLMG HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463