Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

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Identifier: 15679678

GI number: 15679678

Start: 1542813

End: 1544108

Strand: Direct

Name: Not Available

Synonym: MTH1684

Alternate gene names: NA

Gene position: 1542813-1544108 (Clockwise)

Preceding gene: 15679677

Following gene: 15679679

Centisome position: 88.09

GC content: 53.09

Gene sequence:

>1296_bases
ATGTCATTGTGGCCGAACCGTTCGAGGAACTGGCGGGTTCACTGTGACTGCAGGGGGTTTAATTTGGACAGGCACGTCTC
TGAGATAAACGAGAGAATACTTGAAGGGGATGCAGCTGTCTTCACAGCAGATGAGATAAAGGACATGGTCCGTGATGGTG
ACGTCCCATCAGCTGATGAGGTTGACGTGGTAACCACAGCCACCTGTGGTGTCATGTCAGGCACAGCAGCGGTCATGCAC
CTTAGAGTGTCAGAGCCGGGCTCCTTCCGCAAGGCAGCCAGTGTTGAGCTGAACGGAATACCTGCCTATCCTGGCCCATG
CCCAAATGAGAACCTCGGGTCGGTCGACCTCTTCATCTACGGGACCGGTCACAGCAGGGAGGACCCTGACTATGGGGGAG
GTTTTCTGTTCAGGGACCTACTCCTGGGATCTGAGGTCGAGGTCAGGGTCACGTCTGTGGAGGGCAGGGTGGTTGAGTCA
ACGGTCACCATGGATGATATTGAAACAGCCAGGATAGTTGGTACACGCATGGCCTTCAGGAATTACACAGCCCTTGTCAA
TCCAGGAGAAACACCAGTGAAATCCATATTCAATGCATTTGAAATGCCAGAAAATTGCGGCGGTCTTTCCTTCTCTGGCT
GCGGTGACATCAACCCCCTTGAAAACGATCCATCAATGGAGACCGTCCATCAGGGTACCGGGGTGCTTCTGAACGGGGCC
AGGGCCATAGTACTGGGAGAGGGTACAAGGAGTAGCCCCATAAAGCCGAACCTCATGCTCAGCGGCGACCTCCACGACAT
GAAACCCCGTTACATCGGAGGATTCCGGACAGCAGCAGGTCCAGAGATATTTAACACAGTGGCGGTTCCAGTACCGGTAA
CATCAGAAAGGGTTCTTGAGAACCTCATGGTACTTAATTCAGATATAAAACTTCCTGTTGCTGATGTAAGGGATCGTTCA
AGGGTTATAACTGAGATAACCTATGAGGATGTTTGGAGTGGTGACGTGAGACCTGTCCACCACCCAGAGAGGTGCACAGA
CTGCGCGGTCTGCCTTGCAGCCAGGAGGTGCCCCACACATGCCATCGATAACGGCCTGGACCTTGACAGGTGTTTCGGCT
GTGGAGTATGCGCATGGTCCTGTCCTTCAGGAGCATATGAGATGGATACCGGGACAGTCAGGATAGGTGAACTGGCAGTG
CCCATCATATGCAGACAGTCAGACAGGTTAAGGGCCCGCGAACTATCCCTGGAACTCAAAAAGCTCATAGAAAACGGGGA
TTTCCTCATGGGATGA

Upstream 100 bases:

>100_bases
GAGGCAGACCTCACCTTGCACAGGGAGCAGGGCCCGCGACCGATAAAGTGGATGAGGCCCTTGAGGAGGCGAGAGCTGCA
CTCAGTACTGTGAGGAACTG

Downstream 100 bases:

>100_bases
GCGAATGGTTTTGGATGAGGTATAGATGATGGGGGTGTTATGATTCTTGATTATGATGTTATACTTGCACGCTACGGTGA
GGTCGCCATCAAGGGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADEVDVVTTATCGVMSGTAAVMH
LRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIYGTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVES
TVTMDDIETARIVGTRMAFRNYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA
RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLENLMVLNSDIKLPVADVRDRS
RVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTHAIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAV
PIICRQSDRLRARELSLELKKLIENGDFLMG

Sequences:

>Translated_431_residues
MSLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADEVDVVTTATCGVMSGTAAVMH
LRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIYGTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVES
TVTMDDIETARIVGTRMAFRNYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA
RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLENLMVLNSDIKLPVADVRDRS
RVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTHAIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAV
PIICRQSDRLRARELSLELKKLIENGDFLMG
>Mature_430_residues
SLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADEVDVVTTATCGVMSGTAAVMHL
RVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIYGTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVEST
VTMDDIETARIVGTRMAFRNYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGAR
AIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLENLMVLNSDIKLPVADVRDRSR
VITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTHAIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAVP
IICRQSDRLRARELSLELKKLIENGDFLMG

Specific function: Unknown

COG id: COG1900

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1684_METTH (O27719)

Other databases:

- EMBL:   AE000666
- PIR:   B69092
- RefSeq:   NP_276795.1
- ProteinModelPortal:   O27719
- SMR:   O27719
- STRING:   O27719
- GeneID:   1470769
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1684
- NMPDR:   fig|187420.1.peg.1650
- eggNOG:   arNOG04915
- HOGENOM:   HBG539015
- OMA:   PGPCPNE
- ProtClustDB:   CLSK876664
- BioCyc:   MTHE187420:MTH1684-MONOMER
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002708
- InterPro:   IPR017677
- ProDom:   PD011569
- TIGRFAMs:   TIGR03287

Pfam domain/function: PF01837 DUF39

EC number: NA

Molecular weight: Translated: 46951; Mature: 46820

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADE
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCC
VDVVTTATCGVMSGTAAVMHLRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIY
EEEEEEECCCHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
GTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVESTVTMDDIETARIVGTRMAFR
ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEEEEEHHHCCHHHHHHHHHHHH
NYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA
CCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECC
RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLE
EEEEEECCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCHHHCEEEECCCCCHHHHHH
NLMVLNSDIKLPVADVRDRSRVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTH
HHHHHCCCCCCCHHHHCCCHHEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCH
AIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAVPIICRQSDRLRARELSLELK
HHCCCCCHHHHHCCCEEEECCCCCCEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHHH
KLIENGDFLMG
HHHCCCCCCCC
>Mature Secondary Structure 
SLWPNRSRNWRVHCDCRGFNLDRHVSEINERILEGDAAVFTADEIKDMVRDGDVPSADE
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCC
VDVVTTATCGVMSGTAAVMHLRVSEPGSFRKAASVELNGIPAYPGPCPNENLGSVDLFIY
EEEEEEECCCHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
GTGHSREDPDYGGGFLFRDLLLGSEVEVRVTSVEGRVVESTVTMDDIETARIVGTRMAFR
ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEEEEEHHHCCHHHHHHHHHHHH
NYTALVNPGETPVKSIFNAFEMPENCGGLSFSGCGDINPLENDPSMETVHQGTGVLLNGA
CCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECC
RAIVLGEGTRSSPIKPNLMLSGDLHDMKPRYIGGFRTAAGPEIFNTVAVPVPVTSERVLE
EEEEEECCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCHHHCEEEECCCCCHHHHHH
NLMVLNSDIKLPVADVRDRSRVITEITYEDVWSGDVRPVHHPERCTDCAVCLAARRCPTH
HHHHHCCCCCCCHHHHCCCHHEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCH
AIDNGLDLDRCFGCGVCAWSCPSGAYEMDTGTVRIGELAVPIICRQSDRLRARELSLELK
HHCCCCCHHHHHCCCEEEECCCCCCEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHHH
KLIENGDFLMG
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463