| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679596
GI number: 15679596
Start: 1466744
End: 1467907
Strand: Direct
Name: Not Available
Synonym: MTH1601
Alternate gene names: NA
Gene position: 1466744-1467907 (Clockwise)
Preceding gene: 15679579
Following gene: 15679598
Centisome position: 83.75
GC content: 51.46
Gene sequence:
>1164_bases TTGGAAATGGATGAAACACTGCTTATGATCCCCGGGCCGACGAGGGTGGCCCAGAGAGTCCTTAAGGCAATGTCAGAGAA CATTGTTAACCACAGGAGCGCCCTCTTTGGCAGGATCCTGACTGAAACGACTGAGATGATGTCCGATGTTTTCAGGACCA GCAATAAGTCTTACCTTCTGACGGGTTCAGGGACAGCTGCAATGGAAGCCGCAGTTGCAAACATTATAGAACCCGGCGAT AAGATCCTGAATGTTGTTGGGGGTAAATTTGGTCAGAGGTTCGCCCAGATAGTGGAGGCCTTTGGAGGCGAATCCATCAC CATAGACGTGGAGTGGGGTAAGGCCGTTAACCCCGATGACATTGGATACACCCTAGAGGAGAATGATGATATAAAGGCAG TCACAGTAGTCCACAATGAGACATCAACAGGTGTTGCTAACCCCATCAGGGAGATAGGGAAGATAATGGACGACTACGAC GCCCTCTACATAGTTGACACGGTTTCATCCCTGGGAGGGGATGAGGTCGATGTTGAGTCCTACGGCATAGACATCTGTGT TACAGGTTCCCAGAAGTGCCTTGCAGCACCCCCGGGCATGGCAGCCATAACCCTCAGCAACGACGCCTGGAGGGTCATTG AAGCTGTGGATAATCCCCGGACATACTACCTGAACCTCAAGAAGTACAGGAAGAGCGGTGACGCGGAGCCACCTGAGACA CCATACACCCCTGCAGTTTCACTCATATACGCAATGCATGAGGCCCTCAAGGTTATAATGGAGGAGGGACTCAGCAACAG GATAAAGAGGCACAAGATAGCTGCAGAGGCCACAAGGAATGCGGTGAAGGCCCTCGACCTTGAACTGTTCCCTGATGAAG CAGTTTCATCAACAACGGTCACGGCTGTTAATCTCCCGGAGGGAGTTACAGATGGTGAACTGAGGGGGACAATGAGGAAC AAGTACCATGTTGAGCTTGCAGGGGGACAGGACCACCTCAAGGGAAGGATATTCCGTATCGGTCACATGGGTAACATAAC CCACAGGGAACTTATAACAACATTTTCAGCCCTTGAGATGACCCTCAGGGAGCTCGGATTTGAGGTTGAAATGGGAGAGG CTGTTGCAGCAGTTGCAGACACCTACCTCCCTGAGGACCTCTAA
Upstream 100 bases:
>100_bases CGGATTTACTGATGGCTGGCCGGGACTCATGTAAATCTTTTTAAATGGACAGATTAAAAATAGATACAGGTTATGAAATC CACTTTAATCTGGAGGTTTT
Downstream 100 bases:
>100_bases ATATCTATTTTTTCGCGGATTTCTCCTTTTTCTGGCGGACCCTAAAACATTCTCCACCCGGAATCACCATGGCCCCTGTT CGTTGACGAAGAGCTCTCCG
Product: aspartate aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MEMDETLLMIPGPTRVAQRVLKAMSENIVNHRSALFGRILTETTEMMSDVFRTSNKSYLLTGSGTAAMEAAVANIIEPGD KILNVVGGKFGQRFAQIVEAFGGESITIDVEWGKAVNPDDIGYTLEENDDIKAVTVVHNETSTGVANPIREIGKIMDDYD ALYIVDTVSSLGGDEVDVESYGIDICVTGSQKCLAAPPGMAAITLSNDAWRVIEAVDNPRTYYLNLKKYRKSGDAEPPET PYTPAVSLIYAMHEALKVIMEEGLSNRIKRHKIAAEATRNAVKALDLELFPDEAVSSTTVTAVNLPEGVTDGELRGTMRN KYHVELAGGQDHLKGRIFRIGHMGNITHRELITTFSALEMTLRELGFEVEMGEAVAAVADTYLPEDL
Sequences:
>Translated_387_residues MEMDETLLMIPGPTRVAQRVLKAMSENIVNHRSALFGRILTETTEMMSDVFRTSNKSYLLTGSGTAAMEAAVANIIEPGD KILNVVGGKFGQRFAQIVEAFGGESITIDVEWGKAVNPDDIGYTLEENDDIKAVTVVHNETSTGVANPIREIGKIMDDYD ALYIVDTVSSLGGDEVDVESYGIDICVTGSQKCLAAPPGMAAITLSNDAWRVIEAVDNPRTYYLNLKKYRKSGDAEPPET PYTPAVSLIYAMHEALKVIMEEGLSNRIKRHKIAAEATRNAVKALDLELFPDEAVSSTTVTAVNLPEGVTDGELRGTMRN KYHVELAGGQDHLKGRIFRIGHMGNITHRELITTFSALEMTLRELGFEVEMGEAVAAVADTYLPEDL >Mature_387_residues MEMDETLLMIPGPTRVAQRVLKAMSENIVNHRSALFGRILTETTEMMSDVFRTSNKSYLLTGSGTAAMEAAVANIIEPGD KILNVVGGKFGQRFAQIVEAFGGESITIDVEWGKAVNPDDIGYTLEENDDIKAVTVVHNETSTGVANPIREIGKIMDDYD ALYIVDTVSSLGGDEVDVESYGIDICVTGSQKCLAAPPGMAAITLSNDAWRVIEAVDNPRTYYLNLKKYRKSGDAEPPET PYTPAVSLIYAMHEALKVIMEEGLSNRIKRHKIAAEATRNAVKALDLELFPDEAVSSTTVTAVNLPEGVTDGELRGTMRN KYHVELAGGQDHLKGRIFRIGHMGNITHRELITTFSALEMTLRELGFEVEMGEAVAAVADTYLPEDL
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=365, Percent_Identity=33.1506849315069, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536281, Length=346, Percent_Identity=34.1040462427746, Blast_Score=177, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6321079, Length=361, Percent_Identity=27.9778393351801, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI17530823, Length=343, Percent_Identity=31.4868804664723, Blast_Score=177, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 42231; Mature: 42231
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMDETLLMIPGPTRVAQRVLKAMSENIVNHRSALFGRILTETTEMMSDVFRTSNKSYLL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TGSGTAAMEAAVANIIEPGDKILNVVGGKFGQRFAQIVEAFGGESITIDVEWGKAVNPDD ECCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC IGYTLEENDDIKAVTVVHNETSTGVANPIREIGKIMDDYDALYIVDTVSSLGGDEVDVES CCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCEEHHH YGIDICVTGSQKCLAAPPGMAAITLSNDAWRVIEAVDNPRTYYLNLKKYRKSGDAEPPET CCEEEEEECCCCEEECCCCCEEEEECCCCEEHHHHCCCCEEEEEEHHHHHCCCCCCCCCC PYTPAVSLIYAMHEALKVIMEEGLSNRIKRHKIAAEATRNAVKALDLELFPDEAVSSTTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEE TAVNLPEGVTDGELRGTMRNKYHVELAGGQDHLKGRIFRIGHMGNITHRELITTFSALEM EEEECCCCCCCCHHHHCCCCEEEEEEECCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHH TLRELGFEVEMGEAVAAVADTYLPEDL HHHHCCCEEECCHHHHHHHHHCCCCCC >Mature Secondary Structure MEMDETLLMIPGPTRVAQRVLKAMSENIVNHRSALFGRILTETTEMMSDVFRTSNKSYLL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TGSGTAAMEAAVANIIEPGDKILNVVGGKFGQRFAQIVEAFGGESITIDVEWGKAVNPDD ECCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC IGYTLEENDDIKAVTVVHNETSTGVANPIREIGKIMDDYDALYIVDTVSSLGGDEVDVES CCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCEEHHH YGIDICVTGSQKCLAAPPGMAAITLSNDAWRVIEAVDNPRTYYLNLKKYRKSGDAEPPET CCEEEEEECCCCEEECCCCCEEEEECCCCEEHHHHCCCCEEEEEEHHHHHCCCCCCCCCC PYTPAVSLIYAMHEALKVIMEEGLSNRIKRHKIAAEATRNAVKALDLELFPDEAVSSTTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEE TAVNLPEGVTDGELRGTMRNKYHVELAGGQDHLKGRIFRIGHMGNITHRELITTFSALEM EEEECCCCCCCCHHHHCCCCEEEEEEECCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHH TLRELGFEVEMGEAVAAVADTYLPEDL HHHHCCCEEECCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]